Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5 104 1e-20 seq1 104 1e-20 >seq5 Length=1965937 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1963579 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1963636 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1963637 TAAT-CAACGCAAGCT 1963651 >seq1 Length=2919042 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 7923 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 7866 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 7865 TAAT-CAACGCAAGCT 7851 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 10255 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 10198 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 10197 TAAT-CAACGCAAGCT 10183 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1319212 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1319269 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1319270 TAAT-CAACGCAAGCT 1319284 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1325661 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1325604 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 1325603 TAAT-CAACGCAAGCT 1325589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799977440