Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq5 197 1e-48
seq1 197 1e-48
>seq5
Length=1965937
Score = 197 bits (218), Expect = 1e-48
Identities = 153/181 (85%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCA 68
|||| ||||||||| |||| |||| ||||||||||||| | ||| |||| ||| ||
Sbjct 1964509 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1964450
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
|||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct 1964449 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATG 1964391
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct 1964390 ATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTT 1964331
Query 189 A 189
|
Sbjct 1964330 A 1964330
>seq1
Length=2919042
Score = 197 bits (218), Expect = 1e-48
Identities = 153/181 (85%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCA 68
|||| ||||||||| |||| |||| ||||||||||||| | ||| |||| ||| ||
Sbjct 6993 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 7052
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
|||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct 7053 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATG 7111
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct 7112 ATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTT 7171
Query 189 A 189
|
Sbjct 7172 A 7172
Score = 197 bits (218), Expect = 1e-48
Identities = 153/181 (85%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCA 68
|||| ||||||||| |||| |||| ||||||||||||| | ||| |||| ||| ||
Sbjct 1320141 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1320082
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
|||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct 1320081 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATG 1320023
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct 1320022 ATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTT 1319963
Query 189 A 189
|
Sbjct 1319962 A 1319962
Score = 197 bits (218), Expect = 1e-48
Identities = 153/181 (85%), Gaps = 1/181 (1%)
Strand=Plus/Plus
Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCA 68
|||| ||||||||| |||| |||| ||||||||||||| | ||| |||| ||| ||
Sbjct 1324731 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1324790
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
|||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||
Sbjct 1324791 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATG 1324849
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| |||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct 1324850 ATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTT 1324909
Query 189 A 189
|
Sbjct 1324910 A 1324910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999960320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |