Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 360 4e-97
seq1 360 4e-97
>seq5
Length=1965937
Score = 360 bits (398), Expect = 4e-97
Identities = 270/311 (87%), Gaps = 7/311 (2%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||| |||||||| | || ||| || || || ||||||||
Sbjct 1963925 GAACGAGACCTTAACCT-CTAAATAGGGCTGTTAGCATTTTGCTGG-CGAGCGCTTCTTA 1963868
Query 79 GAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1963867 GGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 1963808
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||| ||||||||||||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 1963807 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA---CCTTGGC 1963751
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 1963750 CGAGAGGTCTGGGAAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTTT 1963691
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct 1963690 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 1963631
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 1963630 TGCCCTTTGTA 1963620
>seq1
Length=2919042
Score = 360 bits (398), Expect = 4e-97
Identities = 270/311 (87%), Gaps = 7/311 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||| |||||||| | || ||| || || || ||||||||
Sbjct 7577 GAACGAGACCTTAACCT-CTAAATAGGGCTGTTAGCATTTTGCTGG-CGAGCGCTTCTTA 7634
Query 79 GAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 7635 GGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 7694
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||| ||||||||||||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 7695 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA---CCTTGGC 7751
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 7752 CGAGAGGTCTGGGAAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTTT 7811
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct 7812 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 7871
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 7872 TGCCCTTTGTA 7882
Score = 360 bits (398), Expect = 4e-97
Identities = 270/311 (87%), Gaps = 7/311 (2%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||| |||||||| | || ||| || || || ||||||||
Sbjct 1319558 GAACGAGACCTTAACCT-CTAAATAGGGCTGTTAGCATTTTGCTGG-CGAGCGCTTCTTA 1319501
Query 79 GAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1319500 GGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 1319441
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||| ||||||||||||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 1319440 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA---CCTTGGC 1319384
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 1319383 CGAGAGGTCTGGGAAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTTT 1319324
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct 1319323 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 1319264
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 1319263 TGCCCTTTGTA 1319253
Score = 360 bits (398), Expect = 4e-97
Identities = 270/311 (87%), Gaps = 7/311 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||| |||||||| | || ||| || || || ||||||||
Sbjct 1325315 GAACGAGACCTTAACCT-CTAAATAGGGCTGTTAGCATTTTGCTGG-CGAGCGCTTCTTA 1325372
Query 79 GAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1325373 GGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 1325432
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197
|||| ||||||||||||||||||||||||||||| |||||| |||||| | |||||||
Sbjct 1325433 TAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA---CCTTGGC 1325489
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 1325490 CGAGAGGTCTGGGAAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTTT 1325549
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct 1325550 TGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCC 1325609
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 1325610 TGCCCTTTGTA 1325620
Score = 354 bits (392), Expect = 2e-95
Identities = 270/312 (87%), Gaps = 8/312 (3%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||| |||||||| | || ||| || || || ||||||||
Sbjct 9908 GAACGAGACCTTAACCT-CTAAATAGGGCTGTTAGCATTTTGCTGG-CGAGCGCTTCTTA 9965
Query 79 GAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 9966 GGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 10025
Query 138 TAGATGTT-CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196
|||| ||| |||||||||||||||||||||||||| |||||| |||||| | ||||||
Sbjct 10026 TAGACGTTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA---CCTTGG 10082
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 10083 CCGAGAGGTCTGGGAAATCTTGAGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTT 10142
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct 10143 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCC 10202
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 10203 CTGCCCTTTGTA 10214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199924224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |