Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq5 201 2e-49
seq1 201 2e-49
seq6 73.4 6e-11
>seq5
Length=1965937
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 1960222 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1960165
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1960164 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1960105
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 1960104 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1960047
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 1960046 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1959987
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 1959986 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1959945
>seq1
Length=2919042
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 3323 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 3380
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3381 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 3440
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 3441 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 3498
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 3499 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 3558
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 3559 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 3600
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 1315855 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1315798
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1315797 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1315738
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 1315737 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1315680
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 1315679 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1315620
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 1315619 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1315578
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 1329018 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1329075
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1329076 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1329135
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 1329136 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1329193
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 1329194 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1329253
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 1329254 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1329295
Score = 197 bits (218), Expect = 2e-48
Identities = 218/282 (77%), Gaps = 9/282 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 13613 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 13670
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 13671 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 13730
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 13731 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 13788
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 13789 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 13848
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 13849 AGCAATGTCACGATGCGC-GGGATAAATCCTTTGCATACGAC 13889
>seq6
Length=1276505
Score = 73.4 bits (80), Expect = 6e-11
Identities = 102/141 (72%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 141 GCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCCGAACCTTAGCAGGCCGGCAACG 198
|||| | | ||| ||||||||||| | || | | | ||||| |||||||| ||| |
Sbjct 1276091 GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGGAACCATAGCAGGCTGGCGCTG 1276032
Query 199 GGCGTCCCGCGGAAGCGCGGGGCGC-TCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257
|| | | |||| | | | || | || || |||| ||||| |||| |||||| ||
Sbjct 1276031 GGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGATAGCAATGTCACGATGCGCGGG 1275972
Query 258 GATAAATCCTTTGCAGACGAC 278
||||||||||||||| |||||
Sbjct 1275971 GATAAATCCTTTGCATACGAC 1275951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199936512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |