Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5 201 2e-49 seq1 201 2e-49 seq6 73.4 6e-11 >seq5 Length=1965937 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 1960222 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1960165 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1960164 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1960105 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 1960104 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1960047 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 1960046 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1959987 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 1959986 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1959945 >seq1 Length=2919042 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 3323 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 3380 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3381 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 3440 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 3441 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 3498 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 3499 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 3558 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 3559 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 3600 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 1315855 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1315798 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1315797 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1315738 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 1315737 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1315680 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 1315679 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1315620 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 1315619 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1315578 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 1329018 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1329075 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1329076 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1329135 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 1329136 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1329193 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 1329194 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1329253 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 1329254 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1329295 Score = 197 bits (218), Expect = 2e-48 Identities = 218/282 (77%), Gaps = 9/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 13613 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 13670 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13671 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 13730 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 13731 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 13788 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 13789 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 13848 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 13849 AGCAATGTCACGATGCGC-GGGATAAATCCTTTGCATACGAC 13889 >seq6 Length=1276505 Score = 73.4 bits (80), Expect = 6e-11 Identities = 102/141 (72%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 141 GCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCCGAACCTTAGCAGGCCGGCAACG 198 |||| | | ||| ||||||||||| | || | | | ||||| |||||||| ||| | Sbjct 1276091 GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGGAACCATAGCAGGCTGGCGCTG 1276032 Query 199 GGCGTCCCGCGGAAGCGCGGGGCGC-TCAGCTGGCGGATTGCAATTTCACCATGCGCAGG 257 || | | |||| | | | || | || || |||| ||||| |||| |||||| || Sbjct 1276031 GGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGATAGCAATGTCACGATGCGCGGG 1275972 Query 258 GATAAATCCTTTGCAGACGAC 278 ||||||||||||||| ||||| Sbjct 1275971 GATAAATCCTTTGCATACGAC 1275951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199936512