Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5 700 0.0 seq1 700 0.0 >seq5 Length=1965937 Score = 700 bits (776), Expect = 0.0 Identities = 460/506 (91%), Gaps = 14/506 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||| Sbjct 1964710 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1964769 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1964770 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1964829 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 1964830 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1964889 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1964890 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1964949 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | ||||| ||||||||| |||||||||||||||| || ||| |||| | Sbjct 1964950 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1964998 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| || |||||| || |||||||||||||||| Sbjct 1964999 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1965058 Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||| ||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1965059 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1965118 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 1965119 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1965177 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 1965178 TGAGACAAGCATATGACTACTGGCAG 1965203 >seq1 Length=2919042 Score = 700 bits (776), Expect = 0.0 Identities = 460/506 (91%), Gaps = 14/506 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||| Sbjct 6792 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 6733 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6732 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6673 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 6672 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 6613 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6612 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 6553 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | ||||| ||||||||| |||||||||||||||| || ||| |||| | Sbjct 6552 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 6504 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| || |||||| || |||||||||||||||| Sbjct 6503 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 6444 Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||| ||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| Sbjct 6443 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 6384 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 6383 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 6325 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 6324 TGAGACAAGCATATGACTACTGGCAG 6299 Score = 700 bits (776), Expect = 0.0 Identities = 460/506 (91%), Gaps = 14/506 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||| Sbjct 1320342 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1320401 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320402 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1320461 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 1320462 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1320521 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320522 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1320581 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | ||||| ||||||||| |||||||||||||||| || ||| |||| | Sbjct 1320582 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1320630 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| || |||||| || |||||||||||||||| Sbjct 1320631 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1320690 Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||| ||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1320691 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1320750 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 1320751 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1320809 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 1320810 TGAGACAAGCATATGACTACTGGCAG 1320835 Score = 700 bits (776), Expect = 0.0 Identities = 460/506 (91%), Gaps = 14/506 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||| Sbjct 1324530 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1324471 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1324470 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1324411 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 1324410 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1324351 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1324350 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1324291 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | ||||| ||||||||| |||||||||||||||| || ||| |||| | Sbjct 1324290 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1324242 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| || |||||| || |||||||||||||||| Sbjct 1324241 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1324182 Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||| ||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1324181 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1324122 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 1324121 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1324063 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 1324062 TGAGACAAGCATATGACTACTGGCAG 1324037 Score = 75.2 bits (82), Expect = 3e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210 || |||| || |||| | || | ||||| ||| | || | |||||||||||||||| || Sbjct 2529298 AAATCCCTGTGACCCTTCGAAAGAATGGTTGGCTATTAGCATACCATCGAAAGTTGAGAG 2529357 Query 211 GGCAGAAATTTGAATGAAC 229 |||||||||| |||||||| Sbjct 2529358 GGCAGAAATTGGAATGAAC 2529376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399879168