Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5 700 0.0
seq1 700 0.0
>seq5
Length=1965937
Score = 700 bits (776), Expect = 0.0
Identities = 460/506 (91%), Gaps = 14/506 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||
Sbjct 1964710 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1964769
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1964770 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1964829
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1964830 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1964889
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1964890 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1964949
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| ||||| ||||||||| |||||||||||||||| || ||| |||| |
Sbjct 1964950 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1964998
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||
Sbjct 1964999 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1965058
Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1965059 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1965118
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1965119 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1965177
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 1965178 TGAGACAAGCATATGACTACTGGCAG 1965203
>seq1
Length=2919042
Score = 700 bits (776), Expect = 0.0
Identities = 460/506 (91%), Gaps = 14/506 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||
Sbjct 6792 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 6733
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6732 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 6673
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 6672 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 6613
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6612 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 6553
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| ||||| ||||||||| |||||||||||||||| || ||| |||| |
Sbjct 6552 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 6504
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||
Sbjct 6503 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 6444
Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 6443 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 6384
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 6383 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 6325
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 6324 TGAGACAAGCATATGACTACTGGCAG 6299
Score = 700 bits (776), Expect = 0.0
Identities = 460/506 (91%), Gaps = 14/506 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||
Sbjct 1320342 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1320401
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320402 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1320461
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1320462 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1320521
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320522 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1320581
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| ||||| ||||||||| |||||||||||||||| || ||| |||| |
Sbjct 1320582 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1320630
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||
Sbjct 1320631 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1320690
Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1320691 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1320750
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1320751 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1320809
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 1320810 TGAGACAAGCATATGACTACTGGCAG 1320835
Score = 700 bits (776), Expect = 0.0
Identities = 460/506 (91%), Gaps = 14/506 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||
Sbjct 1324530 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATCGTTATTTATTGTCACTACCT 1324471
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324470 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1324411
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1324410 TCTCAGGCTCCCTCTCCGGAACCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1324351
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324350 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1324291
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
| ||||| ||||||||| |||||||||||||||| || ||| |||| |
Sbjct 1324290 CGAGGCCCTGCGATTCGAAAAGTTATTATGAATCATCACGGA-----------TGTTGAT 1324242
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||
Sbjct 1324241 TTTTTATCTAATAAATACAGCCCTTCCGGAGGTCGGGCTTGGACGCATGTATTAGCTCTA 1324182
Query 360 GAATTACCACGGTTAT-CCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||| ||| | ||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1324181 GAATTGCCAGGCGTATGCCAATTAGCAAGGTACTATCAAATAAACGATAACTGATTTAAT 1324122
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1324121 GAGCCATTCGCAGTTTCACTGTATA-ATCGCTTATACTTAGACATGCATGGCTTAATCTT 1324063
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 1324062 TGAGACAAGCATATGACTACTGGCAG 1324037
Score = 75.2 bits (82), Expect = 3e-11
Identities = 64/79 (81%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210
|| |||| || |||| | || | ||||| ||| | || | |||||||||||||||| ||
Sbjct 2529298 AAATCCCTGTGACCCTTCGAAAGAATGGTTGGCTATTAGCATACCATCGAAAGTTGAGAG 2529357
Query 211 GGCAGAAATTTGAATGAAC 229
|||||||||| ||||||||
Sbjct 2529358 GGCAGAAATTGGAATGAAC 2529376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399879168
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