Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11- 25] 8 sequences; 13,077,109 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4 320 3e-85 seq1 118 2e-24 >seq4 Length=1835850 Score = 320 bits (354), Expect = 3e-85 Identities = 221/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||||||| |||| |||||||||||||||||| | ||| |||| |||||| Sbjct 1827918 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1827859 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 1827858 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1827799 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 1827798 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1827739 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct 1827738 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1827680 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 1827679 AGTTAGGGG 1827671 Score = 203 bits (224), Expect = 6e-50 Identities = 135/149 (91%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 |||||||||| |||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct 1835638 TTCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAG 1835579 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||||||||||| ||||||||||||||||||||||| || ||||||| ||| Sbjct 1835578 AGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTT 1835519 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| |||||||||||||||| Sbjct 1835518 TTCATTAATCA-AGAACGAAAGTTAGGGG 1835491 >seq1 Length=3422859 Score = 118 bits (130), Expect = 2e-24 Identities = 81/89 (91%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||||||||| | ||||||||||||||||||||||| || ||||||| ||| Sbjct 2119048 AGGTGAAATTCTTGGATT-ACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTT 2118990 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| |||||||||||||||| Sbjct 2118989 TTCATTAATCA-AGAACGAAAGTTAGGGG 2118962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199926784