Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11-
25] 8 sequences; 13,077,109 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4 320 3e-85
seq1 118 2e-24
>seq4
Length=1835850
Score = 320 bits (354), Expect = 3e-85
Identities = 221/249 (89%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
|||| ||||||||| |||| |||||||||||||||||| | ||| |||| ||||||
Sbjct 1827918 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1827859
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1827858 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1827799
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1827798 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1827739
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||
Sbjct 1827738 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1827680
Query 310 AGTTAGGGG 318
|||||||||
Sbjct 1827679 AGTTAGGGG 1827671
Score = 203 bits (224), Expect = 6e-50
Identities = 135/149 (91%), Gaps = 1/149 (1%)
Strand=Plus/Minus
Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229
|||||||||| |||||||||||||||||| |||||||| |||||||||| |||||||
Sbjct 1835638 TTCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAG 1835579
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||
Sbjct 1835578 AGGTGAAATTCTTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTT 1835519
Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||| ||||||||||||||||
Sbjct 1835518 TTCATTAATCA-AGAACGAAAGTTAGGGG 1835491
>seq1
Length=3422859
Score = 118 bits (130), Expect = 2e-24
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
|||||||||||||||||| | ||||||||||||||||||||||| || ||||||| |||
Sbjct 2119048 AGGTGAAATTCTTGGATT-ACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTT 2118990
Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||||| ||||||||||||||||
Sbjct 2118989 TTCATTAATCA-AGAACGAAAGTTAGGGG 2118962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199926784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |