Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11- 25] 8 sequences; 13,077,109 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4 545 1e-152 seq1 542 1e-151 seq5 123 1e-25 >seq4 Length=1835850 Score = 545 bits (604), Expect = 1e-152 Identities = 516/653 (79%), Gaps = 58/653 (9%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| || |||| |||||||| | ||||||||||||| Sbjct 1826307 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 1826248 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| || Sbjct 1826247 ACCGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTTGAAA 1826188 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||| ||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct 1826187 AGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCAAGCAGACA------ 1826134 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCT- 278 ||||| ||| ||| | |||||||||| | | Sbjct 1826133 ------------CGGCCT-TCG---------------TGCCG---GGCCAGCATCGGTTG 1826105 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGG 338 | | ||| |||||| || | ||||||| || || |||| | | |||||||| | Sbjct 1826104 CTAGGGGT-GGATAA-GGAACAAGGAATGTAGCTCC--TCGGAG--TATTATAGCCTTGC 1826051 Query 339 GTGGAATGCGGCCCGCCTG-GACTGAGGTCCGCG-----CTCCGGCTAGGATGCTGGCGT 392 | | || | ||| | | ||| |||| | ||| || ||||||||||||||| Sbjct 1826050 GCG--ATACA-CCCACTGGCGACCGAGGCCTGCGGTATTCTTTACCTAGGATGCTGGCGT 1825994 Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 |||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 1825993 AATGGTTGCAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 1825934 Query 453 TTTGGGTG--TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGG 510 |||||||| | |||||| ||||| ||||||||| | ||||| ||| |||| ||| Sbjct 1825933 TTTGGGTGGATAAAACCCCAGCGCGGAATGAAAGTAA---GAGGTTGGAGCCCGCATGGG 1825877 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 |||| ||||||||| || || || | |||| || |||||||| |||||||||||||||| Sbjct 1825876 CGCACAATCGACCGACCCAGAAGTTTACGGACGGGTTTGAGTAGGAGCATAGCTGTTGGG 1825817 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1825816 ACCCGAAAGATGGTGAACTATACCTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 1825757 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||||||||| ||||||||||||||||| ||| ||||||||||||||| Sbjct 1825756 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATCTGGGTATAGGGGCGA 1825704 Score = 545 bits (604), Expect = 1e-152 Identities = 516/653 (79%), Gaps = 58/653 (9%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| || |||| |||||||| | ||||||||||||| Sbjct 1834127 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 1834068 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| || Sbjct 1834067 ACCGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTTGAAA 1834008 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||| ||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct 1834007 AGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCAAGCAGACA------ 1833954 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCT- 278 ||||| ||| ||| | |||||||||| | | Sbjct 1833953 ------------CGGCCT-TCG---------------TGCCG---GGCCAGCATCGGTTG 1833925 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGG 338 | | ||| |||||| || | ||||||| || || |||| | | |||||||| | Sbjct 1833924 CTAGGGGT-GGATAA-GGAACAAGGAATGTAGCTCC--TCGGAG--TATTATAGCCTTGC 1833871 Query 339 GTGGAATGCGGCCCGCCTG-GACTGAGGTCCGCG-----CTCCGGCTAGGATGCTGGCGT 392 | | || | ||| | | ||| |||| | ||| || ||||||||||||||| Sbjct 1833870 GCG--ATACA-CCCACTGGCGACCGAGGCCTGCGGTATTCTTTACCTAGGATGCTGGCGT 1833814 Query 393 AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTG 452 |||||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 1833813 AATGGTTGCAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTG 1833754 Query 453 TTTGGGTG--TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGG 510 |||||||| | |||||| ||||| ||||||||| | ||||| ||| |||| ||| Sbjct 1833753 TTTGGGTGGATAAAACCCCAGCGCGGAATGAAAGTAA---GAGGTTGGAGCCCGCATGGG 1833697 Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 |||| ||||||||| || || || | |||| || |||||||| |||||||||||||||| Sbjct 1833696 CGCACAATCGACCGACCCAGAAGTTTACGGACGGGTTTGAGTAGGAGCATAGCTGTTGGG 1833637 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 1833636 ACCCGAAAGATGGTGAACTATACCTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 1833577 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| |||||||||| ||||||||||||||||| ||| ||||||||||||||| Sbjct 1833576 CTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATCTGGGTATAGGGGCGA 1833524 >seq1 Length=3422859 Score = 542 bits (600), Expect = 1e-151 Identities = 514/652 (79%), Gaps = 57/652 (9%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| || |||| |||||||| | ||||||||||||| Sbjct 2117601 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 2117542 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| || Sbjct 2117541 ACCGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTTGAAA 2117482 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||| ||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct 2117481 AGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCAAGCAGACA------ 2117428 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTC 279 ||||| ||| ||| | |||||||||| | | Sbjct 2117427 ------------CGGCCT-TCG---------------TGCCG---GGCCAGCATCGGTTG 2117399 Query 280 GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGG 339 ||| |||||| || | ||||||| || || |||| | | |||||||| | | Sbjct 2117398 CTAGGGT-GGATAA-GGAACAAGGAATGTAGCTCC--TCGGAG--TATTATAGCCTTGCG 2117345 Query 340 TGGAATGCGGCCCGCCTG-GACTGAGGTCCGCG-----CTCCGGCTAGGATGCTGGCGTA 393 | || | ||| | | ||| |||| | ||| || |||||||||||||||| Sbjct 2117344 CG--ATACA-CCCACTGGCGACCGAGGCCTGCGGTATTCTTTACCTAGGATGCTGGCGTA 2117288 Query 394 ATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGT 453 ||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 2117287 ATGGTTGCAAGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGT 2117228 Query 454 TTGGGTG--TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 ||||||| | |||||| ||||| ||||||||| | ||||| ||| |||| ||| Sbjct 2117227 TTGGGTGGATAAAACCCCAGCGCGGAATGAAAGTAA---GAGGTTGGAGCCCGCATGGGC 2117171 Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 |||| ||||||||| || || || | |||| || |||||||| ||||||||||||||||| Sbjct 2117170 GCACAATCGACCGACCCAGAAGTTTACGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGA 2117111 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 2117110 CCCGAAAGATGGTGAACTATACCTGGATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 2117051 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| ||||||||||||||||| ||| ||||||||||||||| Sbjct 2117050 TCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATCTGGGTATAGGGGCGA 2116999 >seq5 Length=1382059 Score = 123 bits (136), Expect = 1e-25 Identities = 120/152 (79%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 || || | |||| ||||||||||| ||||||||||||||| ||||| | |||||| || Sbjct 956662 GAAGTTTACGGACGGATTTGAGTAGGAGCATAGCTGTTGGAACCCG-AGGATGGTATCCT 956604 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 || || | |||||||| ||||||| |||||||||||||| | || || || || || Sbjct 956603 ATACCCGGATAGGGTGGAGCCAGATGAAACTCTGGTGGATGTTC-TTCCGATTGTGACGA 956545 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 | ||||| |||||| | | || |||||||||| Sbjct 956544 GTAAATCTATCGTCGATTCTGAGTATAGGGGC 956513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999828400