Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11-
25] 8 sequences; 13,077,109 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 329 5e-88
seq4 324 2e-86
>seq1
Length=3422859
Score = 329 bits (364), Expect = 5e-88
Identities = 230/258 (89%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2118462 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2118521
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC- 120
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| ||
Sbjct 2118522 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGC--GCT 2118579
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| | | | | | | |||||||| |||||||||||||||||||||||| |||||
Sbjct 2118580 CGCCAGCAAAATGCTAACAGCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATTA 2118638
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2118639 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 2118698
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 2118699 AAGAGCTCTCAATCTGTC 2118716
>seq4
Length=1835850
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1827170 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1827229
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 1827230 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1827289
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 1827290 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1827346
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1827347 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1827406
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1827407 AAAGAGCTCTCAATCTGTC 1827425
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1834990 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1835049
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 1835050 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1835109
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 1835110 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1835166
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1835167 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1835226
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1835227 AAAGAGCTCTCAATCTGTC 1835245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799938248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |