Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11- 25] 8 sequences; 13,077,109 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 329 5e-88 seq4 324 2e-86 >seq1 Length=3422859 Score = 329 bits (364), Expect = 5e-88 Identities = 230/258 (89%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2118462 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 2118521 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC- 120 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| || Sbjct 2118522 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGC--GCT 2118579 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| | | | | | | |||||||| |||||||||||||||||||||||| ||||| Sbjct 2118580 CGCCAGCAAAATGCTAACAGCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATTA 2118638 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 2118639 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 2118698 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 2118699 AAGAGCTCTCAATCTGTC 2118716 >seq4 Length=1835850 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1827170 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1827229 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 1827230 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1827289 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 1827290 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1827346 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1827347 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1827406 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1827407 AAAGAGCTCTCAATCTGTC 1827425 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1834990 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1835049 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 1835050 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1835109 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 1835110 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1835166 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1835167 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1835226 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1835227 AAAGAGCTCTCAATCTGTC 1835245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799938248