Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11- 25] 8 sequences; 13,077,109 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4 747 0.0 seq6 744 0.0 seq1 728 0.0 >seq4 Length=1835850 Score = 747 bits (828), Expect = 0.0 Identities = 490/537 (91%), Gaps = 9/537 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1823955 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 1824014 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct 1824015 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGAACCGGGATT 1824074 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | ||| | ||| || |||| ||||| ||| |||| |||| ||||||| | Sbjct 1824075 ACCCAG---AGG--CGTAAAGCTAGAATGTGGTCA-TGACAACCAATTCCCCTTCATTCA 1824128 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 1824129 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 1824185 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 1824186 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 1824245 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1824246 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1824305 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1824306 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1824365 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1824366 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1824425 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1824426 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1824482 Score = 747 bits (828), Expect = 0.0 Identities = 490/537 (91%), Gaps = 9/537 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1831775 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 1831834 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct 1831835 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGAACCGGGATT 1831894 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | ||| | ||| || |||| ||||| ||| |||| |||| ||||||| | Sbjct 1831895 ACCCAG---AGG--CGTAAAGCTAGAATGTGGTCA-TGACAACCAATTCCCCTTCATTCA 1831948 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 1831949 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 1832005 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 1832006 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 1832065 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832066 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1832125 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832126 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1832185 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832186 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1832245 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1832246 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1832302 >seq6 Length=1325445 Score = 744 bits (824), Expect = 0.0 Identities = 490/537 (91%), Gaps = 10/537 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1732 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAG-CCCCCTTAGGACACCTGCGTTATC 1674 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct 1673 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGAACCGGGATT 1614 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | ||| | ||| || |||| ||||| ||| |||| |||| ||||||| | Sbjct 1613 ACCCAG---AGG--CGTAAAGCTAGAATGTGGTCA-TGACAACCAATTCCCCTTCATTCA 1560 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 1559 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 1503 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 1502 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 1443 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1442 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1383 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1382 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1323 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1322 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1263 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1206 >seq1 Length=3422859 Score = 728 bits (806), Expect = 0.0 Identities = 488/537 (91%), Gaps = 12/537 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2115256 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAG-CCCCCTTAGGACACCTGCGTTATC 2115314 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct 2115315 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGAACCGGGATT 2115374 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | ||| | ||| || |||| ||||| ||| |||| |||| ||||||| | Sbjct 2115375 ACCCAG---AGG--CGTAAAGCTAGAATGTGGTCA-TGACAACCAATTCCCCTTCATTCA 2115428 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 2115429 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 2115485 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 2115486 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 2115545 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2115546 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 2115605 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2115606 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA-T 2115664 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2115665 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG-TTACCCGCGCTTGGTTGAATTTCT 2115723 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2115724 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 2115780 Score = 219 bits (242), Expect = 1e-54 Identities = 180/215 (84%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3422248 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 3422307 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct 3422308 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGAACCGGGATT 3422367 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | ||| | ||| || |||| ||||| ||| |||| |||| ||||||| | Sbjct 3422368 ACCCAG---AGG--CGTAAAGCTAGAATGTGGTC-ATGACAACCAATTCCCCTTCATTCA 3422421 Query 187 TTAAGTaaaaaaaCGATAAG-GGTAGTGGTATTTC 220 ||||||||||||| || | ||||| ||| |||| Sbjct 3422422 GTAAGTAAAAAAACAATGGGAGGTAGAGGTTTTTC 3422456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199869184