Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11-
25] 8 sequences; 13,077,109 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq6 201 2e-49
seq4 201 2e-49
seq1 201 2e-49
>seq6
Length=1325445
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 2057 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2114
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2115 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2174
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 2175 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 2232
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 2233 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 2292
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 2293 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 2334
>seq4
Length=1835850
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 1823630 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1823573
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1823572 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1823513
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 1823512 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1823455
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 1823454 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1823395
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 1823394 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1823353
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 1831450 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1831393
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1831392 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1831333
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 1831332 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1831275
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 1831274 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1831215
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 1831214 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1831173
>seq1
Length=3422859
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 2114931 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2114874
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2114873 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2114814
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 2114813 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 2114756
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 2114755 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 2114696
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 2114695 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 2114654
Score = 201 bits (222), Expect = 2e-49
Identities = 218/282 (77%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 3421923 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 3421866
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3421865 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 3421806
Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177
||| || | || ||| |||| | | ||| ||||||||||| | || | | | |
Sbjct 3421805 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 3421748
Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236
|||| |||||||| ||| ||| | | || ||| || | || || || ||||
Sbjct 3421747 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 3421688
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| |||| |||||| ||||||||||||||||| |||||
Sbjct 3421687 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 3421646
Score = 187 bits (206), Expect = 4e-45
Identities = 217/283 (77%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| |
Sbjct 2119557 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2119614
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT-CCATGCC 119
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2119615 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCCATGCT 2119674
Query 120 AGAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCC 176
|||| || | || ||| |||| | | ||| ||||||||||| | || | | |
Sbjct 2119675 AGAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCG 2119732
Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGA 235
||||| |||||||| ||| ||| | | || ||| || | || || || |||
Sbjct 2119733 GAACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGA 2119792
Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| ||||| |||| |||||| ||||| ||||||||||| |||||
Sbjct 2119793 TAGCAATGTCACGATGCGCGGGGAT-AATCCTTTGCATACGAC 2119834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199936512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |