Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106125.1_202016-11- 25] 8 sequences; 13,077,109 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6 201 2e-49 seq4 201 2e-49 seq1 201 2e-49 >seq6 Length=1325445 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 2057 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2114 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2115 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2174 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 2175 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 2232 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 2233 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 2292 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 2293 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 2334 >seq4 Length=1835850 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 1823630 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1823573 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1823572 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1823513 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 1823512 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1823455 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 1823454 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1823395 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 1823394 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1823353 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 1831450 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 1831393 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1831392 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1831333 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 1831332 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 1831275 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 1831274 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 1831215 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 1831214 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 1831173 >seq1 Length=3422859 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 2114931 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2114874 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2114873 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2114814 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 2114813 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 2114756 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 2114755 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 2114696 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 2114695 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 2114654 Score = 201 bits (222), Expect = 2e-49 Identities = 218/282 (77%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 3421923 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 3421866 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3421865 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 3421806 Query 121 GAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCCG 177 ||| || | || ||| |||| | | ||| ||||||||||| | || | | | | Sbjct 3421805 GAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCGG 3421748 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGAT 236 |||| |||||||| ||| ||| | | || ||| || | || || || |||| Sbjct 3421747 AACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGAT 3421688 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| |||| |||||| ||||||||||||||||| ||||| Sbjct 3421687 AGCAATGTCACGATGCGCGGGGATAAATCCTTTGCATACGAC 3421646 Score = 187 bits (206), Expect = 4e-45 Identities = 217/283 (77%), Gaps = 10/283 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| |||| |||||||| |||||| | Sbjct 2119557 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGGCCCTGTCTGAGCAGGCATT 2119614 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT-CCATGCC 119 | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2119615 GGGCCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCCATGCT 2119674 Query 120 AGAA-CGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG--CTTCGGCCCC 176 |||| || | || ||| |||| | | ||| ||||||||||| | || | | | Sbjct 2119675 AGAAGCGACGACCTTACCTC--GCACGTTGGAGTTGGATACGAATAAGACTTTTGTCGCG 2119732 Query 177 GAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGG-AAGCGCGGGGCGCTCAGCTGGCGGA 235 ||||| |||||||| ||| ||| | | || ||| || | || || || ||| Sbjct 2119733 GAACCATAGCAGGCTGGCGCTGGGTGCGTGGTGGAAAGACCGCGTGCCTTTGCCGGTGGA 2119792 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||||| |||| |||||| ||||| ||||||||||| ||||| Sbjct 2119793 TAGCAATGTCACGATGCGCGGGGAT-AATCCTTTGCATACGAC 2119834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199936512