Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cerataphis_20brasiliensis_20yeast- like_20symbiont_20[genbank_20GCA_5F000372705.1_202013-04-22] 1,181 sequences; 25,465,455 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq677 262 3e-65 seq780 132 4e-26 >seq677 Length=7370 Score = 262 bits (290), Expect = 3e-65 Identities = 630/944 (67%), Gaps = 12/944 (1%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| || || || || |||||||| || | |||||||| || | |||||||| Sbjct 5407 GGCAGGGCTAGTGAGGCCAGATTGCAGACGGCGACTTCGTCAGGTGCCGAGTACTCGACG 5466 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 ||||| ||||| || || | || |||||||||| |||| ||||||||||||||| Sbjct 5467 ATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTACTCTTGCGG 5526 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| |||||||||| ||| | ||| |||| || || || | || | ||| Sbjct 5527 TTGCAGTGGTCCTTGTACAGCATAAAGGGATTGCCCGTTTCCGTCTGTGCTTCCAGGATA 5586 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240 | | ||| || | ||| |||||| | | | ||| | || | ||| ||||| | Sbjct 5587 GAATACCAGAGCTTCTGAGCCCGCACCGT-CTTGCGGCCACGGCCCTCGCGCTCGTACTT 5645 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||| || || || ||||| | |||| ||| | || || | || || Sbjct 5646 TTCGTACAGAGCCTCAAATTCATCACCGTAGCAGTCGGCCAGGCCGGGGCATTCGTTGGG 5705 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGC---ATAAATAGATCAGGTAT 66357 ||||| |||| |||||| || | | |||| |||| ||| || || || || || || Sbjct 5706 GCACATGAGCGTCCAATCGCCGT--TTTTCTCCACG-CGCTTCATGAACAGGTCCGGAAT 5762 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| ||||| |||||| ||||| || || |||||| |||| || || ||||||| Sbjct 5763 CCACAGGGCCAGGAAGAGGTCGCGGGCCCGAACCTCCTCCTTGCCATGGTTCTTGCGCAG 5822 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || || |||||||| | ||||| ||||| || |||| ||| ||||| || | || Sbjct 5823 ATCCAGAAACTCAAACACATCGGCGTGCCACGGCTCCAAGTATATGGCAAAGGCACCTGG 5882 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || ||| ||| || |||||||||||||| || ||||||||||||||| | ||| || Sbjct 5883 CCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTATTGTTGAAGACACGAAGCATGGG 5942 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | || ||||| || | || ||||||||| | ||| || || || || || Sbjct 5943 AATGACACCGTTCGAAGTCCCGTTGGTGCCGGCAATGTAAGAACCGGTAGCACGGATCCG 6002 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TCGGCCAC-T 66655 || || || || || || || |||||| |||| ||||| || || || | | Sbjct 6003 ATGCACGTTGAGCCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGCGT 6062 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 ||| | | ||||| || ||| ||| |||| ||| | |||| |||| || ||| Sbjct 6063 GTC--GTAGATGCCCTCGATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGAAAGC 6120 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || | || ||| |||| ||| || || || | || || || ||| | | || Sbjct 6121 TGACACTGAGGCGTGCCGGCGTTGAACAGCGTCGGCGACGCATGGGTGAAGAACTTGCTG 6180 Query 66776 GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCA 66835 |||||| ||||||||||||| ||| || || || |||| || || | ||| Sbjct 6181 GACATGAGGTTGTACGTCTCGAGGACTCGGTCGATATTGCCGCCCCATATACCCACGGCA 6240 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAG 66895 ||||| | | || |||||| || || || | | | | || | | || || Sbjct 6241 ACGCGCATGATCATGTGTTGAGGGCGCTCAACGATCTTGCCGTCGAGCTTGAGCAAATAA 6300 Query 66896 GAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || |||||||| ||||||| ||||| ||| ||| || || || Sbjct 6301 GAACGTTCCAGTGTCTTGAAGCCAAAATACTGGTAGTTAAAGTC 6344 Score = 91.5 bits (100), Expect = 1e-13 Identities = 315/476 (66%), Gaps = 14/476 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || |||||||||||||| | || ||||||| || | || |||||||||||||| Sbjct 4501 TCTACCGTGAACTGGATGGGCGCCGCCGCCGCCTGCGTACGCAGGTAGTACATGCCGGTT 4560 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATT-CGGCT 65195 ||||| || ||| ||| || |||||||| | || | ||||||| | ||| | Sbjct 4561 TTGAGCCCCAGCTT-CCAGCCAGTAAAATGCAT-GCTGGTGATTTTGCCCATCGACGGGT 4618 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | |||||| ||| ||||| | ||| || || || |||| Sbjct 4619 CTTTCATGTGGATGTTGAGCGACTGGGACTGGTCGATAAAGGCACCGCGGTCGGCCGCCA 4678 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | | | || ||| ||||||||||| |||||||| || | | | || ||| Sbjct 4679 TCTGCACCACCTGTCGCTGCGAAATCTCCCAGACCGTCTTGTAAAGT-GCCTTGACGTCA 4737 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCA 65372 || || | |||| ||||| || ||| || | ||||| || || || || Sbjct 4738 GCAGGGATGTTGGGGATGTTCTGGA-TGGACC-CGTTTTCCGCAATGATTCGGTTTTTCA 4795 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGAC 65430 |||| || ||||| || ||||| || | || | |||| | || | | |||| || Sbjct 4796 TCGAGTCCGACCATAAGCCCAAGTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACCAC 4853 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 ||||||||||| | ||| || || || || |||||||||||| || || ||| | Sbjct 4854 CTGGAACTCGCCCGCCAGCACGCGTCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCA 4913 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 || | ||||| || || || | || || || |||||||| || |||| || Sbjct 4914 CTCGTTATTGCCGAGGATCTGCGACGTGCTGGCCGTCGGCATGGGGGCTACCAGCA 4969 >seq780 Length=34333 Score = 132 bits (146), Expect = 4e-26 Identities = 304/453 (67%), Gaps = 5/453 (1%) Strand=Plus/Plus Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 |||| | |||| ||| | || ||||| | ||||||||| | || |||||||| | ||| Sbjct 30484 TTTGCTCAACGCTTGGTAGCCTTTGCTGCGGTCGAGGGCATCTTCTTCAGTGGTGCCTTT 30543 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 ||| | ||||| ||| | ||||||||||| || ||||| || ||||||| ||| || Sbjct 30544 GCCTCCATCTTCTGGCTCAAGAAACGTGGCCTAATGCCTGGCTTGACCTTTTCCAACGAA 30603 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659 | || || || || ||||| |||| |||||||| | | ||| || ||| | Sbjct 30604 CTCATTTCGCGAGATGAGGGTTTGCACACGGATTTTGCCTGTCTCCTA--CACTCGCACT 30661 Query 61660 CTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719 | || || | | || | ||| || | || || || || ||| Sbjct 30662 -TCAAAAACCGGGCCAGCAAACAGGTCATCCATGACATCATCACCGATGCCGTCACCATC 30720 Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA 61779 ||||| |||||||| || || || ||||| | || | |||||||||| | Sbjct 30721 GAACAAGAATTTCTCACCGAAGCCCTGCCCTGCGCATTACTCGGCATGAACGCCACCTTG 30780 Query 61780 ATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT-GAAGCG 61838 ||| ||||||||| || || ||||||||||| || | |||| |||| | ||| | Sbjct 30781 ATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCTTCTAGTCGCCCTGGGCAACGAAAAG 30840 Query 61839 GATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGAC 61898 | | || | || ||||| |||||||||||||| | || ||||| | |||||||| Sbjct 30841 G-TGTACAGGTCGTCGAACCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAGAC 30899 Query 61899 GAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || ||||| || ||||| || || ||||| || Sbjct 30900 CAACTTTTTTGAAAAACGGGTCGGTGACTACCA 30932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562277629840