Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq68 403 3e-110
>seq68
Length=174617
Score = 403 bits (446), Expect = 3e-110
Identities = 284/318 (89%), Gaps = 5/318 (2%)
Strand=Plus/Plus
Query 5 TGGTCCGGCC-GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63
||| |||||| ||||| ||| |||| ||| || |||||||||||||||| ||| |||||
Sbjct 40484 TGGCCCGGCCCGGGCCCCTCCCTCTGTGGAACCCCATGCCCTTCACTGGGCGTGGCGGGG 40543
Query 64 -AGCCAGGACTTTT-ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCT-CGAAT 120
| |||||||||| |||||||||||||||||||| || | |||||||| |||| |||||
Sbjct 40544 GAAGCAGGACTTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTTCGAAT 40603
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 40604 ACATTAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCG 40663
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||||||
Sbjct 40664 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCGATCGTCAGAGGTGAAATTC 40723
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
|||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct 40724 TTGGATCGATTGAAGACTCACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 40783
Query 301 GTGAACGAAAGTTAGGGG 318
| ||||||||||||||||
Sbjct 40784 G-GAACGAAAGTTAGGGG 40800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194710144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |