Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq68 403 3e-110 >seq68 Length=174617 Score = 403 bits (446), Expect = 3e-110 Identities = 284/318 (89%), Gaps = 5/318 (2%) Strand=Plus/Plus Query 5 TGGTCCGGCC-GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 ||| |||||| ||||| ||| |||| ||| || |||||||||||||||| ||| ||||| Sbjct 40484 TGGCCCGGCCCGGGCCCCTCCCTCTGTGGAACCCCATGCCCTTCACTGGGCGTGGCGGGG 40543 Query 64 -AGCCAGGACTTTT-ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCT-CGAAT 120 | |||||||||| |||||||||||||||||||| || | |||||||| |||| ||||| Sbjct 40544 GAAGCAGGACTTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTTCGAAT 40603 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 40604 ACATTAGCATGGAATAATGAAATAGGACGCGCGGTTCTATTTTGTTGGTTTCTAGGACCG 40663 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||||| ||||||||| ||||||||| || |||||||||||||||| Sbjct 40664 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCGATCGTCAGAGGTGAAATTC 40723 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||||| |||||||||| |||||||||||||| || |||||||||||||||||||||| Sbjct 40724 TTGGATCGATTGAAGACTCACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 40783 Query 301 GTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 40784 G-GAACGAAAGTTAGGGG 40800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194710144