Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq68 648 0.0
>seq68
Length=174617
Score = 648 bits (718), Expect = 0.0
Identities = 555/676 (82%), Gaps = 17/676 (3%)
Strand=Plus/Plus
Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83
|| ||||||||||| |||||||||| |||||||||||| |||| || |||||||| ||
Sbjct 42480 GTAAAGCTCCTTCGGCGAGTCGAGTAGTTTGGGAATGCTGCTCAAAGCGGGAGGTATATG 42539
Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 42540 TCTTCTAAGGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 42599
Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203
||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct 42600 GAAAAGCACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTCG 42659
Query 204 CAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCG--GCCGGTGCACTCTTCTGCG 260
|||||| | | | | | ||| ||||| | | || |||||||| |||| | |||
Sbjct 42660 TGGCCAGACCCGGGCCCGGCGGATCATCCGGCGCTCGCGTCGCCGGTGCGCTCTGCCGCG 42719
Query 261 G-TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGGC-CCCCTT 317
| |||||||||||| || || ||||| |||||||||| |||||||||||| |||||
Sbjct 42720 GCCCAGGCCAGCATCGGCCCGCGGCGG-GGGATAAAGGCGGCGGGAATGTGGCTCCCCTC 42778
Query 318 CGGGGGGTG----TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCT 373
||||||| | |||||||||| ||| ||||| | || || | ||||| |||||
Sbjct 42779 CGGGGGGAGTGATTTATAGCCCGCCGTGCAATGCCCCGCGGGCGGGCCGAGGTACGCGCA 42838
Query 374 CCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433
|| || |||||||||||||||||| |||| ||||||||| ||||||||||||||||
Sbjct 42839 CCCGCAAGGATGCTGGCGTAATGGCCACCAGCGACCCGTCTTGAAACACGGACCAAGGAG 42898
Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAA--CCCGTGCGCGTAATGAAAGTGAACGG 491
|| | |||||||||||| ||| | |||| ||| |||||||||||||||||||
Sbjct 42899 TCGTCCTCGTATGCGAGTGTTCGGGCGCCAAAACCCCCGACGCGTAATGAAAGTGAACGC 42958
Query 492 AGGTGGGAACCCGT----GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATT 547
|||| |||||| | ||| ||| || ||||||||||||||| |||||||||||
Sbjct 42959 TGGTGAGAACCCCTCTCACGGGGCGCATCACCGACCGATCCTGATGCTCTCGGATGGATT 43018
Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607
|||||| ||||||| | |||||||||||| ||||||||||||| | |||||||||
Sbjct 43019 TGAGTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCCGTGTAGGGTGAA 43078
Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 43079 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAAC 43138
Query 668 TTGGGTATAGGGGCGA 683
|||| || |||||||
Sbjct 43139 ATGGGCATGGGGGCGA 43154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079987601900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |