Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq68 648 0.0 >seq68 Length=174617 Score = 648 bits (718), Expect = 0.0 Identities = 555/676 (82%), Gaps = 17/676 (3%) Strand=Plus/Plus Query 24 GTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 || ||||||||||| |||||||||| |||||||||||| |||| || |||||||| || Sbjct 42480 GTAAAGCTCCTTCGGCGAGTCGAGTAGTTTGGGAATGCTGCTCAAAGCGGGAGGTATATG 42539 Query 84 TCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 143 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 42540 TCTTCTAAGGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT 42599 Query 144 GAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| | Sbjct 42600 GAAAAGCACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTCG 42659 Query 204 CAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCG--GCCGGTGCACTCTTCTGCG 260 |||||| | | | | | ||| ||||| | | || |||||||| |||| | ||| Sbjct 42660 TGGCCAGACCCGGGCCCGGCGGATCATCCGGCGCTCGCGTCGCCGGTGCGCTCTGCCGCG 42719 Query 261 G-TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGGC-CCCCTT 317 | |||||||||||| || || ||||| |||||||||| |||||||||||| ||||| Sbjct 42720 GCCCAGGCCAGCATCGGCCCGCGGCGG-GGGATAAAGGCGGCGGGAATGTGGCTCCCCTC 42778 Query 318 CGGGGGGTG----TTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCT 373 ||||||| | |||||||||| ||| ||||| | || || | ||||| ||||| Sbjct 42779 CGGGGGGAGTGATTTATAGCCCGCCGTGCAATGCCCCGCGGGCGGGCCGAGGTACGCGCA 42838 Query 374 CCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433 || || |||||||||||||||||| |||| ||||||||| |||||||||||||||| Sbjct 42839 CCCGCAAGGATGCTGGCGTAATGGCCACCAGCGACCCGTCTTGAAACACGGACCAAGGAG 42898 Query 434 TCTAACATCTATGCGAGTGTTTGGGTGTCAAA--CCCGTGCGCGTAATGAAAGTGAACGG 491 || | |||||||||||| ||| | |||| ||| ||||||||||||||||||| Sbjct 42899 TCGTCCTCGTATGCGAGTGTTCGGGCGCCAAAACCCCCGACGCGTAATGAAAGTGAACGC 42958 Query 492 AGGTGGGAACCCGT----GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATT 547 |||| |||||| | ||| ||| || ||||||||||||||| ||||||||||| Sbjct 42959 TGGTGAGAACCCCTCTCACGGGGCGCATCACCGACCGATCCTGATGCTCTCGGATGGATT 43018 Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 |||||| ||||||| | |||||||||||| ||||||||||||| | ||||||||| Sbjct 43019 TGAGTAGGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCCGTGTAGGGTGAA 43078 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 43079 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAAC 43138 Query 668 TTGGGTATAGGGGCGA 683 |||| || ||||||| Sbjct 43139 ATGGGCATGGGGGCGA 43154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079987601900