Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq68 147 3e-33 >seq68 Length=174617 Score = 147 bits (162), Expect = 3e-33 Identities = 172/220 (78%), Gaps = 12/220 (5%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct 40658 CTAGAAACCAACAAAATAGAACCGCGCGTCCTATTTCATTATTCCATGCTAATGTATTCG 40599 Query 66 -GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGT-AAAAGTCCTGGTTCCTCCG 123 || || |||||| | || |||||||||||| |||| || |||||||||| |||| ||| Sbjct 40598 AAGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAAGTCCTGCTTCCCCCG 40539 Query 124 -CAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGG--CTGGGTAATG-CAGTA 177 ||| ||| |||| ||||| ||| | | ||||| |||| | ||| | ||||| Sbjct 40538 CCACGCCCAGTGAAGGGCAT--GGGGTTCCACAGAGGGAGGGGCCCGGGCCGGGCCAGTA 40481 Query 178 CTCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 | ||| |||||||||||| || ||| ||||||| ||| Sbjct 40480 CACGCGGTGAGGCGGACC-GGCCAGCCAGGCCCGAGGTTC 40442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196667252