Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq68 147 3e-33
>seq68
Length=174617
Score = 147 bits (162), Expect = 3e-33
Identities = 172/220 (78%), Gaps = 12/220 (5%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||
Sbjct 40658 CTAGAAACCAACAAAATAGAACCGCGCGTCCTATTTCATTATTCCATGCTAATGTATTCG 40599
Query 66 -GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGT-AAAAGTCCTGGTTCCTCCG 123
|| || |||||| | || |||||||||||| |||| || |||||||||| |||| |||
Sbjct 40598 AAGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAAGTCCTGCTTCCCCCG 40539
Query 124 -CAC-ACCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGG--CTGGGTAATG-CAGTA 177
||| ||| |||| ||||| ||| | | ||||| |||| | ||| | |||||
Sbjct 40538 CCACGCCCAGTGAAGGGCAT--GGGGTTCCACAGAGGGAGGGGCCCGGGCCGGGCCAGTA 40481
Query 178 CTCGCCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
| ||| |||||||||||| || ||| ||||||| |||
Sbjct 40480 CACGCGGTGAGGCGGACC-GGCCAGCCAGGCCCGAGGTTC 40442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196667252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |