Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20yeast- like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq68 695 0.0 >seq68 Length=174617 Score = 695 bits (770), Expect = 0.0 Identities = 458/505 (91%), Gaps = 1/505 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 40327 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGTATCAGTATTTATTGTCACTACCT 40268 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 40267 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 40208 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 40207 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 40148 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 40147 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCA 40088 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| |||||| || ||||||| ||||||||||| ||||||| ||||| ||||| Sbjct 40087 CAAGGCCGTGCGATCCGCGAAGTTATCATGAATCACCAGTGAGCCCCAGAGGGCATTGGT 40028 Query 301 TTTT-TATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 |||| |||||||||||||| |||||||| ||| ||| |||| ||||||||||||||||| Sbjct 40027 TTTTGAATCTAATAAATACATCCCTTCCGGAGTTGGGATTTTCAGCATGTATTAGCTCTA 39968 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||| Sbjct 39967 GAATTACCACGGTTATCCAAGTAGTAAGGTGCTATCAAATAAACGATAACTTGTGTAATG 39908 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct 39907 AGCCATTCGCAGTTTCGCCGTATAATTCGCTTATACTTAGACATGCATGGCTTAATCTTT 39848 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 39847 GAGACAAGCATATGACTACTGGCAG 39823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391269888