Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20yeast-
like_20symbiont_20[genbank_20GCA_5F000758425.1_202014-09-26] 578 sequences; 26,809,569 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq69 271 6e-68
seq24 125 6e-24
>seq69
Length=174959
Score = 271 bits (300), Expect = 6e-68
Identities = 629/935 (67%), Gaps = 21/935 (2%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| ||||| || || || || ||||||||||| | || ||||| || | ||||| ||
Sbjct 172805 GGCAGGGCTAGCGAGGCCAGATTGCAGACAGCAACTTCATCAGGTGCAGAGTACTCAACG 172864
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
||||| ||||| || || | || |||||||||| |||| |||||| ||||||||
Sbjct 172865 ATTTCCGTGCAAAGGTTCGAACTCCGAATGGTGCCCAGGTTCTTTTGATTGCTCTTGCGG 172924
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| |||| |||| |||| || || || || | |||
Sbjct 172925 TTGCAATGATCCTTGTACAGCATGAACGGGTTGCCCGTTTCCGTCTGTACTTCCAGGATA 172984
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240
| | ||| || | ||| |||||| | | | ||| | || | ||| ||||| |
Sbjct 172985 GAATACCACAGCTTCTGAGCCCGCACCGT-CTTGCGGCCACGGCCCTCGCGCTCGTACTT 173043
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACC-CCATACT--TCGGACAGACATGGACACTTGTG 66297
|||||| || || || |||| | || || |||| ||||| ||||| | ||
Sbjct 173044 TTCGTACAGAGCCTCAAA---TTCATCGCCGTAGCAGTCGGCCAGACCGGGACATTCGTT 173100
Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGC---ATAAATAGATCAGG 66354
|| ||||| |||| ||||||||| | | |||| |||| ||| || || || || ||
Sbjct 173101 GGGGCACATGAGCGTCCAATCACCGT--TTTTCTCCACG-CGCTTCATGAACAGGTCGGG 173157
Query 66355 TATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCG 66414
||||| ||||| ||||||| ||||| ||||| |||||| |||| || || |||||
Sbjct 173158 AATCCACAGGGCTAAGAAGAGGTCGCGAGCTCGAACCTCCTCCTTGCCATGGTTCTTGCG 173217
Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT-GGTTCCAGGTAGATGGCGAACGAGC 66473
||| || || |||||||||| || ||||||||| || |||||||| ||||| || | |
Sbjct 173218 CAAATCCAGAAACTCAAAGACATCAGCATGCCATTGGCTCCAGGTATATGGCAAAGGCAC 173277
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| || ||| ||| || |||||||||||||| || ||||| |||||||| | ||
Sbjct 173278 CTGGCCGCTTGTTGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTAAAGACACGAAGCA 173337
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || | || ||||| || | || ||||||||| | ||| || || || || |
Sbjct 173338 TGGGAATGACACCGTTCGAGGTCCCGTTGGTGCCGGCAATGCAAGAGCCGGTAGCACGGA 173397
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG---ATGGCAGCACAATCGG 66650
| || || || || || || ||||||||| |||| ||| ||||| |||| |
Sbjct 173398 TCCGATGCACGTTGAGCCCGATGCCACCGGCCATCTTAGAGATCATGGC-GCACGTCTTG 173456
Query 66651 CCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAAC 66710
|||| | | ||||| || ||| |||| |||| ||| | |||| |||| ||
Sbjct 173457 AGCGTGTC--GTAAATGCCCTCGATGCTGTCATCCTTCATGTCAACGAGGAAGCACGAGG 173514
Query 66711 TAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT 66770
|||||| | || ||| | || ||| || | || | || || || ||| |
Sbjct 173515 ACAGTTGGCACTGAGGCGTGCCAGCGTTGAACAGCGCCGGCGACGCATGGGTGAAGAGCT 173574
Query 66771 GGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA 66830
|| |||||| |||||||| |||| ||| || || || ||||| || || |
Sbjct 173575 TGCTGGACATGAGGTTGTACGTTTCGAGGACTCGGTCGATATTGTCGCCCCATATACCCA 173634
Query 66831 GTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTA 66890
||| ||||| | | || ||| || || || || | | | | || | || |
Sbjct 173635 CGGCAACGCGCATGATCATGTGTTGGGGGCGCTCAACGATCTTGCCGTCGAGCTTCAGCA 173694
Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925
|| || || ||||| ||||||| ||||| |||
Sbjct 173695 GATAAGAACGCTCCAGAGTCTTGAAGCCAAAATAC 173729
>seq24
Length=328731
Score = 125 bits (138), Expect = 6e-24
Identities = 234/336 (70%), Gaps = 11/336 (3%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| ||||| || || || || ||||| | ||||| | ||| |
Sbjct 173173 ATTTGGCAAATGTACAAGAAGGCAGAGGCCTCATTTTGGACAGCCGAGGAAATAGATCTC 173232
Query 61147 TCCAAAGACATGAATGACTGGGA-----GCGTTTATCGAGCGGTGAACAACATTTCATTA 61201
||||| ||| || |||||||| | || | || || | ||| | |||| |
Sbjct 173233 TCCAAGGACTTGCATGACTGGAACAACCGCCTGAAT-GAT-GACGAAAAGTATTTTGTGT 173290
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| | |||| || || ||||| |||||||| ||||||||||| || || | || |
Sbjct 173291 CCCACATCCTGGCCTTTTTCGCCGCCTCGGACGGCATCGTCAATGAAAACTTGGTTGAGC 173350
Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| ||| ||||| || | | ||||| ||||| |||||||| || ||||||
Sbjct 173351 GGTTCAGCG-GCGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGATTTCAGATTATG 173409
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| ||||||| |||| ||| | || |||||||| || |||| ||||
Sbjct 173410 ATGGAGAACATCCACTCCGAGACATACTCCCTCCTGATCGATACCTATATCAAGGAGAAT 173469
Query 61381 GCGGAACGTGAACGAT-TGTTCAATGCCATCGAGAC 61415
|| | || || | || | |||||||| || |||||
Sbjct 173470 GCTCAGCG-GACCTATCTCTTCAATGCTATTGAGAC 173504
Score = 120 bits (132), Expect = 2e-22
Identities = 299/452 (66%), Gaps = 3/452 (1%)
Strand=Plus/Plus
Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539
|||| | |||| ||| |||| ||||| | |||||||||| | || || ||||| | |||
Sbjct 173635 TTTGCTCAACGCTTGGTGGCCTTTGCCGCGGTCGAGGGTATCTTCTTTAGTGGTGCCTTT 173694
Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599
||| | ||||| ||| | ||||| ||||| || ||||| || ||||||| ||| ||
Sbjct 173695 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCTTGACCTTTTCCAACGAA 173754
Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659
| || || || || || || |||| || ||||| | | || || ||| |
Sbjct 173755 CTCATTTCGCGAGATGAAGGTTTGCACACGGACTTTGCATGTCTCCTG--CACTCGC-AC 173811
Query 61660 CTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719
|| || || | | || | ||| || | || || || | |||
Sbjct 173812 CTCAAAAACCGGGCCAGCAAACAGGTCATCTATGACATCATCACCGATGCCGTCGCCATC 173871
Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTA 61779
||||| |||||||| || || || ||||| | || | | |||||||| | |
Sbjct 173872 GAACAAGAATTTCTAACCGAAGCCCTGCCCTGCGCATTACTTGGCATGAACGCTACCTTG 173931
Query 61780 ATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGG 61839
||| ||||||||| || || ||||||||||| || | |||| |||| | | |
Sbjct 173932 ATGAAGCAGTATATCGAGTTCGTTGCCGACCGCCTTCTCGTCGCACTGGGCAACGAAAAG 173991
Query 61840 ATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACG 61899
|| || | || ||| || |||||||||||||| | || ||||| | ||||| ||
Sbjct 173992 ATGTACAGGTCGTCAAATCCCTTTGATTTCATGGAAAACATATCGCTAGGGGGCAAAACC 174051
Query 61900 AATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
|| |||||||| || || || || ||||||||
Sbjct 174052 AACTTTTTCGAAAAGCGGGTTGGTGACTATCA 174083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565199381920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |