Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq71 268 1e-69
>seq71
Length=3573
Score = 268 bits (296), Expect = 1e-69
Identities = 199/229 (87%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1660 GTACAAAGGGCAGGGACATAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1603
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 1602 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 1543
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| |||| ||||| || ||| | || | |||||||||||||||||||
Sbjct 1542 ACCCAAACCTTTCGGTCAAGGAAATGAACTTGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 1483
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1482 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751997391970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |