Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq71 170 1e-40
>seq71
Length=3573
Score = 170 bits (188), Expect = 1e-40
Identities = 108/117 (92%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||| |||||||||||||||| |||| ||||||||||||||| | | ||||||||||
Sbjct 1131 GAACCCGAAGACTTTGATTTCTCATAAGATGCCGAGCGAGTCAAGAAAAAAACATCGCCC 1072
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1071 GATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399065620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |