Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq357 96.9 9e-18 >seq357 Length=8428 Score = 96.9 bits (106), Expect = 9e-18 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || | | |||||||||||||| | | |||||||| ||| ||| Sbjct 4237 ATCTTCACGGCTAATCCAATTTCACTGAGTTTATTGCGGAGACAGTTGTTGTATCATTAA 4178 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||||||| || | | | ||| | | ||||||| ||||||||||||||||| |||| Sbjct 4177 ATCATTCGTGCGGGACCGCATTTAACGGCCAAGGAAATTCGCTACCTTAGGACCCTTATA 4118 Query 135 GTTACGGCCGCCGTTTAC 152 |||| ||||||| || || Sbjct 4117 GTTAAGGCCGCCATTCAC 4100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795486336