Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq357 87.8 4e-15
>seq357
Length=8428
Score = 87.8 bits (96), Expect = 4e-15
Identities = 132/185 (71%), Gaps = 16/185 (9%)
Strand=Plus/Minus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG-GCTCCCACT 257
||| | ||||||||||||| ||||||||||| |||| | ||| |||| |||
Sbjct 3008 TAACTTGCTGACCCATTATGCAAAAGGTACGTCGTCAGTC-----TTTGGACCTCCGACT 2954
Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317
|||| || | || |||| ||||| ||||||| | | |||||||| ||
Sbjct 2953 GCTTATAAGGTTATTAATTCAAGATCTGTTTCACT----TAT-----ATTCTTTTCAACT 2903
Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377
||||||||||||||| |||||||||| | | | | ||||||||||| |||||| ||
Sbjct 2902 TTCCCTCACGGTACT-CTTCACTATCGCTTAATATATTATATTTAGCCTTAGAGGATAGT 2844
Query 378 CCCCC 382
||||
Sbjct 2843 TCCCC 2839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241595555072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |