Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq71 100 2e-19 >seq71 Length=3573 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 1709 TCCGAA-GACCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1653 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| ||||||||||| Sbjct 1652 GGCAGGGACATAAT-CAACGCAAGCT 1628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798990440