Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq71 143 3e-32
>seq71
Length=3573
Score = 143 bits (158), Expect = 3e-32
Identities = 122/144 (85%), Gaps = 5/144 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | || || ||||| |||||||||||||||||||||||
Sbjct 872 CTAGAAACCAACAAAATAGAACCACATGTTCTATTTCATTATTCCATGCTAATGTATTCG 813
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA-GTCCTGGTTCCTCCG- 123
|| | ||||||||||||||||||||||||||||| |||||| | ||||||| ||||
Sbjct 812 AGCAAATGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAAAGGCCCTGGTT-ATCCGA 754
Query 124 CACA-CCAATGAA-GGCATACGGG 145
||| |||||||| ||||||| ||
Sbjct 753 TACACCCAATGAAGGGCATACCGG 730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595197935772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |