Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12- 19] 358 sequences; 8,179,983 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq71 143 3e-32 >seq71 Length=3573 Score = 143 bits (158), Expect = 3e-32 Identities = 122/144 (85%), Gaps = 5/144 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | || || ||||| ||||||||||||||||||||||| Sbjct 872 CTAGAAACCAACAAAATAGAACCACATGTTCTATTTCATTATTCCATGCTAATGTATTCG 813 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA-GTCCTGGTTCCTCCG- 123 || | ||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct 812 AGCAAATGCCTGCTTTGAACACTCTAATTTTCTCAAAGTAAAAGGCCCTGGTT-ATCCGA 754 Query 124 CACA-CCAATGAA-GGCATACGGG 145 ||| |||||||| ||||||| || Sbjct 753 TACACCCAATGAAGGGCATACCGG 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197935772