Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq71 219 4e-55
>seq71
Length=3573
Score = 219 bits (242), Expect = 4e-55
Identities = 164/190 (86%), Gaps = 3/190 (2%)
Strand=Plus/Plus
Query 3 AACCAGGAC-TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
||||||| | ||||||||||| |||||||||| ||||||||||||| |||||||||||||
Sbjct 760 AACCAGGGCCTTTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCATTTGCTCGAATAC 819
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||||||||||| ||||| || || ||||||||||||| |||||||||||| |
Sbjct 820 ATTAGCATGGAATAATGAAATAGAACATGTGGTTCTATTTTGTTGGTTTCTAGGAC--CA 877
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
| |||||| |||| ||| ||| ||||| | ||||||||||||||| ||||||||||||
Sbjct 878 CTGAATGATTAATAGGGACAGTTGGGGGCATTAGTATTCAATTGTCAGAGGTGAAATTCT 937
Query 182 TGGATTTATT 191
| ||||||||
Sbjct 938 TAGATTTATT 947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511998224320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |