Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pneumocystis_20jirovecii_20[genbank_20GCA_5F000333975.2_202012-12-
19] 358 sequences; 8,179,983 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq71 798 0.0
>seq71
Length=3573
Score = 798 bits (884), Expect = 0.0
Identities = 483/508 (95%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 544 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 485
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 425
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||
Sbjct 424 TCTCAGGCTCCCTCTCCGGAATAGAACCCTTATTCCCCGTTACCCGTCGAAACCATGGTA 365
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 364 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 305
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG--AGCCCCGAAGGGCGTTG 298
||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||
Sbjct 304 CAAGGCCATGCGATTCGTTAAGTTATTATGAATGACCAAAGTAAGCCCCGAAGGGCATTG 245
Query 299 GTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTAGCT 356
||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct 244 GTTTTTTATCTAATAAATACATCCCTTCCATAAAGTCGGGATTTTTAGCATGTATTAGCT 185
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||
Sbjct 184 CTAGAATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACTATAACTGATATA 125
Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 124 ATGAGCCATTCGCAGTTTCACCGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 65
Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||
Sbjct 64 TTTGAGACAAGCATATGACTACTGGCAG 37
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510394592768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |