Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq30 291 1e-76 seq19 291 1e-76 >seq30 Length=10296 Score = 291 bits (322), Expect = 1e-76 Identities = 205/229 (90%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1611 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1668 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | | ||||| |||||| Sbjct 1669 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACGGAGTTTCACAAGATT 1728 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| || ||||| || | | ||||||||||||||||||| Sbjct 1729 ACCCAGACCTTCCGGCCAAGGA-ATGAACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1787 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1788 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1836 >seq19 Length=179986 Score = 291 bits (322), Expect = 1e-76 Identities = 205/229 (90%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 173711 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 173768 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| | | ||||| |||||| Sbjct 173769 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACGGAGTTTCACAAGATT 173828 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| || ||||| || | | ||||||||||||||||||| Sbjct 173829 ACCCAGACCTTCCGGCCAAGGA-ATGAACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 173887 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 173888 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 173936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999679460