Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq30 412 6e-113 seq19 412 6e-113 >seq30 Length=10296 Score = 412 bits (456), Expect = 6e-113 Identities = 277/307 (90%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA 71 |||||||||||||||||| | || | ||| |||| | ||||||||| ||||| |||||| Sbjct 2902 CCGGGCCTTTCCTTCTGGCTAGCCTGTATGTCCTTTATTGGGTGTGCAGGGGAACCAGGA 2843 Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 2842 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCTCGAATACATTAGCATG 2783 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2782 GAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 2723 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| |||| | |||||| | ||||||||||||||||||||||||||| | Sbjct 2722 AATAGGGACAGTTGGGGACATTAGTATTGAGTTGTCAGAGGTGAAATTCTTGGATTTACT 2663 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct 2662 CAAGACTAACTACTGCGAAAGCATTTGTCAAGGATGTTTTCATTAGTCA-AGAACGAAAG 2604 Query 312 TTAGGGG 318 ||||||| Sbjct 2603 TTAGGGG 2597 >seq19 Length=179986 Score = 412 bits (456), Expect = 6e-113 Identities = 277/307 (90%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA 71 |||||||||||||||||| | || | ||| |||| | ||||||||| ||||| |||||| Sbjct 175002 CCGGGCCTTTCCTTCTGGCTAGCCTGTATGTCCTTTATTGGGTGTGCAGGGGAACCAGGA 174943 Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATG 131 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 174942 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCTCGAATACATTAGCATG 174883 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 174882 GAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 174823 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| |||| | |||||| | ||||||||||||||||||||||||||| | Sbjct 174822 AATAGGGACAGTTGGGGACATTAGTATTGAGTTGTCAGAGGTGAAATTCTTGGATTTACT 174763 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||||||||||||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct 174762 CAAGACTAACTACTGCGAAAGCATTTGTCAAGGATGTTTTCATTAGTCA-AGAACGAAAG 174704 Query 312 TTAGGGG 318 ||||||| Sbjct 174703 TTAGGGG 174697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199597312