Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq30 762 0.0 seq19 762 0.0 >seq30 Length=10296 Score = 762 bits (844), Expect = 0.0 Identities = 574/665 (86%), Gaps = 10/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 726 TGTGAACCGTTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 667 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 666 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGAACAAGTAGAGTGATCGAAAGA 607 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||||| Sbjct 606 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 547 Query 203 GCAACCAGACTTGCC-CGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG- 260 | | ||||||| | ||||| || | || || | || || | |||| | Sbjct 546 GAGATCAGACTTCCTGCGCAGACTATC--CTTGCTTCT-GCTTGGATCAATAGTCTGTGC 490 Query 261 GTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 || ||||||||||||| | | |||||||||||||| ||||| ||||| | | ||| Sbjct 489 GTGGAGGCCAGCATCAGTTTTGACGGTCGGATAAAGGTTTGGGGAAGGTGGCTCACCTCG 430 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG-CTCCGGC 378 | | |||||||||||| | || ||| ||||| | ||||||||| ||||| || | | Sbjct 429 GTGAGTGTTATAGCCCCAGATGCAATACGGCCAGTTGGGACTGAGGACCGCGGCTTTGCC 370 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| Sbjct 369 TAGGATGCTGGCGTAATGGTCTTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 310 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||| Sbjct 309 CATCTGTGCGAGTGTTTGGGTGGAAAACCCGTGCGCGAAATGAAAGTGAACGTAGGTGGG 250 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || | |||||||||||||||||||| ||| | || | | |||||||||||||||| Sbjct 249 ATCCGC--AAGGTGCACCATCGACCGATCCGGATTTTTTTGAA-GGATTTGAGTAAGAGC 193 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 133 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 132 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 73 Query 679 GGCGA 683 ||||| Sbjct 72 GGCGA 68 >seq19 Length=179986 Score = 762 bits (844), Expect = 0.0 Identities = 574/665 (86%), Gaps = 10/665 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 172826 TGTGAACCGTTTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 172767 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 172766 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGAACAAGTAGAGTGATCGAAAGA 172707 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||||| Sbjct 172706 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 172647 Query 203 GCAACCAGACTTGCC-CGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG- 260 | | ||||||| | ||||| || | || || | || || | |||| | Sbjct 172646 GAGATCAGACTTCCTGCGCAGACTATC--CTTGCTTCT-GCTTGGATCAATAGTCTGTGC 172590 Query 261 GTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 || ||||||||||||| | | |||||||||||||| ||||| ||||| | | ||| Sbjct 172589 GTGGAGGCCAGCATCAGTTTTGACGGTCGGATAAAGGTTTGGGGAAGGTGGCTCACCTCG 172530 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG-CTCCGGC 378 | | |||||||||||| | || ||| ||||| | ||||||||| ||||| || | | Sbjct 172529 GTGAGTGTTATAGCCCCAGATGCAATACGGCCAGTTGGGACTGAGGACCGCGGCTTTGCC 172470 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| Sbjct 172469 TAGGATGCTGGCGTAATGGTCTTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 172410 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||| Sbjct 172409 CATCTGTGCGAGTGTTTGGGTGGAAAACCCGTGCGCGAAATGAAAGTGAACGTAGGTGGG 172350 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || | |||||||||||||||||||| ||| | || | | |||||||||||||||| Sbjct 172349 ATCCGC--AAGGTGCACCATCGACCGATCCGGATTTTTTTGAA-GGATTTGAGTAAGAGC 172293 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172292 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 172233 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 172232 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 172173 Query 679 GGCGA 683 ||||| Sbjct 172172 GGCGA 172168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999056200