Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq36 210 4e-52 seq30 210 4e-52 seq19 210 4e-52 >seq36 Length=3393 Score = 210 bits (232), Expect = 4e-52 Identities = 116/116 (100%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1606 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 1665 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1666 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 1721 Score = 134 bits (148), Expect = 2e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||| Sbjct 2116 ATCCCTGTGGTAACTTTTCTGGCACCTCTGGCCTGAAATTTCCAGGACCCAAAGGATCGA 2175 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 2176 TAGGCCACACTTTCATGGTTTGTATTCAC 2204 Score = 122 bits (134), Expect = 1e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | |||||||||| | || |||||||||||||||||||||||||||||| Sbjct 1166 TACTAAGTCGTATTACCATTGAGTTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 1225 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 1226 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 1257 >seq30 Length=10296 Score = 210 bits (232), Expect = 4e-52 Identities = 116/116 (100%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7587 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 7646 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7647 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 7702 Score = 134 bits (148), Expect = 2e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||| Sbjct 8097 ATCCCTGTGGTAACTTTTCTGGCACCTCTGGCCTGAAATTTCCAGGACCCAAAGGATCGA 8156 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 8157 TAGGCCACACTTTCATGGTTTGTATTCAC 8185 Score = 122 bits (134), Expect = 1e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | |||||||||| | || |||||||||||||||||||||||||||||| Sbjct 7147 TACTAAGTCGTATTACCATTGAGTTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 7206 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 7207 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 7238 >seq19 Length=179986 Score = 210 bits (232), Expect = 4e-52 Identities = 116/116 (100%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169391 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 169450 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169451 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 169506 Score = 210 bits (232), Expect = 4e-52 Identities = 116/116 (100%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179687 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 179746 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179747 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 179802 Score = 134 bits (148), Expect = 2e-29 Identities = 83/89 (93%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||| Sbjct 169901 ATCCCTGTGGTAACTTTTCTGGCACCTCTGGCCTGAAATTTCCAGGACCCAAAGGATCGA 169960 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 169961 TAGGCCACACTTTCATGGTTTGTATTCAC 169989 Score = 122 bits (134), Expect = 1e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | |||||||||| | || |||||||||||||||||||||||||||||| Sbjct 168951 TACTAAGTCGTATTACCATTGAGTTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 169010 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 169011 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 169042 Score = 122 bits (134), Expect = 1e-25 Identities = 82/92 (89%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| | |||||||||| | || |||||||||||||||||||||||||||||| Sbjct 179247 TACTAAGTCGTATTACCATTGAGTTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 179306 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 179307 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 179338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399624064