Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protomyces_20lactucaedebilis_20[genbank_20GCA_5F002105105.1_202017- 04-20] 44 sequences; 12,928,838 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq30 810 0.0 seq19 810 0.0 >seq30 Length=10296 Score = 810 bits (898), Expect = 0.0 Identities = 485/505 (96%), Gaps = 3/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3067 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 3126 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3127 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3186 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 3187 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCAAAACCATGGTA 3246 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3247 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 3306 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| |||||||||||||||||||||||| |||||| ||| ||||| Sbjct 3307 CAAGGCCATGCGATTCGTAAAGTTATTATGAATCACCAAGGAG-CCCGAA-GGCATTGGT 3364 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct 3365 TTTTTATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTAGCATGTATTAGCTCTA 3424 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 3425 GAATTACCACGGGTATCCAAGTAGTAGGGTACTATCAAATAAACGATAACTGATTTAATG 3484 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3485 AGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTT 3544 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 3545 GAGACAAGCATATGACTACTGGCAG 3569 >seq19 Length=179986 Score = 810 bits (898), Expect = 0.0 Identities = 485/505 (96%), Gaps = 3/505 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 175167 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 175226 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175227 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 175286 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| Sbjct 175287 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCAAAACCATGGTA 175346 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175347 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 175406 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||||||||||||||||| |||||||||||||||||||||||| |||||| ||| ||||| Sbjct 175407 CAAGGCCATGCGATTCGTAAAGTTATTATGAATCACCAAGGAG-CCCGAA-GGCATTGGT 175464 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct 175465 TTTTTATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTAGCATGTATTAGCTCTA 175524 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 175525 GAATTACCACGGGTATCCAAGTAGTAGGGTACTATCAAATAAACGATAACTGATTTAATG 175584 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 175585 AGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTT 175644 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 175645 GAGACAAGCATATGACTACTGGCAG 175669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399335424