Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3 251 1e-64 >seq3 Length=2452883 Score = 251 bits (278), Expect = 1e-64 Identities = 204/248 (82%), Gaps = 22/248 (9%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 10588 GTACAAAGGGCAGGGACGTATTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 10645 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 10646 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 10705 Query 120 ACCCGGACCTGTCGGCCAAGG-------------------TGATAGACTCGTTGAATACA 160 |||| ||||| ||||||||| | | |||||||| | | Sbjct 10706 ACCCAGACCTTCCGGCCAAGGATAAAAAATCAAAAGATTTTTTTCAACTCGTTGGCTCCG 10765 Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10766 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 10825 Query 221 AAACTTCC 228 |||||||| Sbjct 10826 AAACTTCC 10833 Score = 251 bits (278), Expect = 1e-64 Identities = 204/248 (82%), Gaps = 22/248 (9%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 21458 GTACAAAGGGCAGGGACGTATTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 21515 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 21516 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 21575 Query 120 ACCCGGACCTGTCGGCCAAGG-------------------TGATAGACTCGTTGAATACA 160 |||| ||||| ||||||||| | | |||||||| | | Sbjct 21576 ACCCAGACCTTCCGGCCAAGGATAAAAAATCAAAAGATTTTTTTCAACTCGTTGGCTCCG 21635 Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21636 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 21695 Query 221 AAACTTCC 228 |||||||| Sbjct 21696 AAACTTCC 21703 Score = 251 bits (278), Expect = 1e-64 Identities = 204/248 (82%), Gaps = 22/248 (9%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 2442666 GTACAAAGGGCAGGGACGTATTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 2442609 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 2442608 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2442549 Query 120 ACCCGGACCTGTCGGCCAAGG-------------------TGATAGACTCGTTGAATACA 160 |||| ||||| ||||||||| | | |||||||| | | Sbjct 2442548 ACCCAGACCTTCCGGCCAAGGATAAAAAATCAAAAGATTTTTTTCAACTCGTTGGCTCCG 2442489 Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2442488 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 2442429 Query 221 AAACTTCC 228 |||||||| Sbjct 2442428 AAACTTCC 2442421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999970860