Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3 387 3e-105 >seq3 Length=2452883 Score = 387 bits (428), Expect = 3e-105 Identities = 268/301 (89%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 23 CCTTCTGGGGATC--CGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT 80 |||||||| | | | |||| ||| | || | ||| |||| ||||||||||||| | Sbjct 11558 CCTTCTGGCAAACTACTCATGTTCTTTATTGAGCGTGGTAGGGAACCAGGACTTTTACCT 11499 Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAA 137 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 11498 TGAAAAAATTAGAGTGTTCAAAGCAGGCAAGTTTTGCTCGAATACATTAGCATGGAATAA 11439 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11438 TAAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 11379 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 11378 GATAGTCGGGGGCATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 11319 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| Sbjct 11318 GAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGG 11260 Query 318 G 318 | Sbjct 11259 G 11259 Score = 387 bits (428), Expect = 3e-105 Identities = 268/301 (89%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 23 CCTTCTGGGGATC--CGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT 80 |||||||| | | | |||| ||| | || | ||| |||| ||||||||||||| | Sbjct 22428 CCTTCTGGCAAACTACTCATGTTCTTTATTGAGCGTGGTAGGGAACCAGGACTTTTACCT 22369 Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAA 137 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 22368 TGAAAAAATTAGAGTGTTCAAAGCAGGCAAGTTTTGCTCGAATACATTAGCATGGAATAA 22309 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22308 TAAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 22249 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 22248 GATAGTCGGGGGCATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 22189 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| Sbjct 22188 GAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGG 22130 Query 318 G 318 | Sbjct 22129 G 22129 Score = 387 bits (428), Expect = 3e-105 Identities = 268/301 (89%), Gaps = 6/301 (2%) Strand=Plus/Plus Query 23 CCTTCTGGGGATC--CGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT 80 |||||||| | | | |||| ||| | || | ||| |||| ||||||||||||| | Sbjct 2441696 CCTTCTGGCAAACTACTCATGTTCTTTATTGAGCGTGGTAGGGAACCAGGACTTTTACCT 2441755 Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAA 137 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2441756 TGAAAAAATTAGAGTGTTCAAAGCAGGCAAGTTTTGCTCGAATACATTAGCATGGAATAA 2441815 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2441816 TAAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 2441875 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2441876 GATAGTCGGGGGCATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 2441935 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| Sbjct 2441936 GAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGG 2441994 Query 318 G 318 | Sbjct 2441995 G 2441995 Score = 385 bits (426), Expect = 9e-105 Identities = 267/300 (89%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 23 CCTTCTGGGGATC--CGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT 80 |||||||| | | | |||| ||| | || | ||| |||| ||||||||||||| | Sbjct 2452585 CCTTCTGGCAAACTACTCATGTTCTTTATTGAGCGTGGTAGGGAACCAGGACTTTTACCT 2452644 Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAA 137 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2452645 TGAAAAAATTAGAGTGTTCAAAGCAGGCAAGTTTTGCTCGAATACATTAGCATGGAATAA 2452704 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2452705 TAAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 2452764 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2452765 GATAGTCGGGGGCATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 2452824 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| Sbjct 2452825 GAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGG 2452883 Score = 383 bits (424), Expect = 3e-104 Identities = 267/301 (89%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 23 CCTTCTGGGGATC--CGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTT 80 |||||||| | | | |||| ||| | || | ||| |||| ||||||||||||| | Sbjct 688 CCTTCTGGCAAACTACTCATGTTCTTTATTGAGCGTGGTAGGGAACCAGGACTTTTACCT 629 Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAA 137 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 628 TGAAAAAATTAGAGTGTTCAAAGCAGGCAAGTTTTGCTCGAATACATTAGCATGGAATAA 569 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 || ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 568 TAAAATAGGACGTGTGGTTCTATTNTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 509 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 GATAGTCGGGGGCATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 449 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| Sbjct 448 GAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGGG 390 Query 318 G 318 | Sbjct 389 G 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199963392