Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3 471 7e-131 >seq3 Length=2452883 Score = 471 bits (522), Expect = 7e-131 Identities = 283/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||||||| | |||| | |||||||||||||||||||||||||||| Sbjct 6422 TACTAAGTTGAATTACCATTGCGACGACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 6481 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6482 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 6541 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 6542 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTA 6601 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 6602 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTGTCC 6661 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 6662 TCAAATTTCGAGGGAACAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6717 Score = 471 bits (522), Expect = 7e-131 Identities = 283/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||||||| | |||| | |||||||||||||||||||||||||||| Sbjct 17292 TACTAAGTTGAATTACCATTGCGACGACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 17351 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17352 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 17411 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 17412 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTA 17471 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 17472 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTGTCC 17531 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 17532 TCAAATTTCGAGGGAACAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 17587 Score = 471 bits (522), Expect = 7e-131 Identities = 283/296 (96%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||||||||| | |||| | |||||||||||||||||||||||||||| Sbjct 2446832 TACTAAGTTGAATTACCATTGCGACGACACTTCATCAGTAGGGTAAAACTAACCTGTCTC 2446773 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2446772 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 2446713 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2446712 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTA 2446653 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2446652 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTGTCC 2446593 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2446592 TCAAATTTCGAGGGAACAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 2446537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399965824