Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3 102 5e-20 >seq3 Length=2452883 Score = 102 bits (112), Expect = 5e-20 Identities = 82/94 (87%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| | || | |||||||||||||| || ||||||||| ||||||||||| || Sbjct 10532 AAGCCAATCCAGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 10587 Query 91 GTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| || ||||||||||| Sbjct 10588 GTACAAAGGGCAGGGACGT-ATTCAACGCAAGCT 10620 Score = 102 bits (112), Expect = 5e-20 Identities = 82/94 (87%), Gaps = 5/94 (5%) Strand=Plus/Plus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| | || | |||||||||||||| || ||||||||| ||||||||||| || Sbjct 21402 AAGCCAATCCAGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 21457 Query 91 GTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| || ||||||||||| Sbjct 21458 GTACAAAGGGCAGGGACGT-ATTCAACGCAAGCT 21490 Score = 102 bits (112), Expect = 5e-20 Identities = 82/94 (87%), Gaps = 5/94 (5%) Strand=Plus/Minus Query 31 AAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGT 90 |||||||| | || | |||||||||||||| || ||||||||| ||||||||||| || Sbjct 2442722 AAGCCAATCCAGA--GGCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGT 2442667 Query 91 GTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||||| || ||||||||||| Sbjct 2442666 GTACAAAGGGCAGGGACGT-ATTCAACGCAAGCT 2442634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799988720