Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3 156 5e-36 >seq3 Length=2452883 Score = 156 bits (172), Expect = 5e-36 Identities = 105/117 (90%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 11401 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTTATTATTCCATGCTAATGTATTCG 11460 Query 66 GGCGTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 11461 AGCAAAACTTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAAGTCCTGGTTCC 11517 Score = 156 bits (172), Expect = 5e-36 Identities = 105/117 (90%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 22271 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTTATTATTCCATGCTAATGTATTCG 22330 Query 66 GGCGTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 22331 AGCAAAACTTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAAGTCCTGGTTCC 22387 Score = 156 bits (172), Expect = 5e-36 Identities = 105/117 (90%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 2441853 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTTATTATTCCATGCTAATGTATTCG 2441794 Query 66 GGCGTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2441793 AGCAAAACTTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAAGTCCTGGTTCC 2441737 Score = 156 bits (172), Expect = 5e-36 Identities = 105/117 (90%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 2452742 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTTATTATTCCATGCTAATGTATTCG 2452683 Query 66 GGCGTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2452682 AGCAAAACTTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAAGTCCTGGTTCC 2452626 Score = 152 bits (168), Expect = 6e-35 Identities = 104/117 (89%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 531 CTAGAAACCAACANAATAGAACCACACGTCCTATTTTATTATTCCATGCTAATGTATTCG 590 Query 66 GGCGTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || || |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 591 AGCAAAACTTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAAGTCCTGGTTCC 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199976936