Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizosaccharomyces_20pombe_20[genbank_20GCA_5F000002945.2_202007- 11-09] 4 sequences; 12,591,251 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 751 0.0 >seq3 Length=2452883 Score = 751 bits (832), Expect = 0.0 Identities = 476/510 (93%), Gaps = 7/510 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||| Sbjct 869 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATTGTTATTTCTTGTCACTACCT 928 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 929 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 988 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 989 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 1048 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1049 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1108 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||| ||||| || | |||||| ||| |||| Sbjct 1109 CAAGGCCATGCGATTCGAAAAGTTATTATGACTCACCAAAAAAAGCCCGAA-GGCATTGG 1167 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 1168 TTTTTTATCTAATAAATACATCCCTTCCAAAAAAGTCGGGATTTTTAGCATGTATTAGCT 1227 Query 357 CTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 1228 CTAGAATTACCACGGTTATCCAAGTAGTTGAGGTACTATCAAATAAACGATAACTGATTT 1287 Query 416 AATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 1288 AATGAGCCATTCGCAGTTTCACAGTACAAAATTGCTTATACTTAGACATGCATGGCTTAA 1347 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 1348 TCTTTGAGACAAGCATATGACTACTGGCAG 1377 Score = 751 bits (832), Expect = 0.0 Identities = 476/510 (93%), Gaps = 7/510 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||| Sbjct 11739 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATTGTTATTTCTTGTCACTACCT 11798 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11799 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 11858 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 11859 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 11918 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11919 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 11978 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||| ||||| || | |||||| ||| |||| Sbjct 11979 CAAGGCCATGCGATTCGAAAAGTTATTATGACTCACCAAAAAAAGCCCGAA-GGCATTGG 12037 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 12038 TTTTTTATCTAATAAATACATCCCTTCCAAAAAAGTCGGGATTTTTAGCATGTATTAGCT 12097 Query 357 CTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 12098 CTAGAATTACCACGGTTATCCAAGTAGTTGAGGTACTATCAAATAAACGATAACTGATTT 12157 Query 416 AATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 12158 AATGAGCCATTCGCAGTTTCACAGTACAAAATTGCTTATACTTAGACATGCATGGCTTAA 12217 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 12218 TCTTTGAGACAAGCATATGACTACTGGCAG 12247 Score = 751 bits (832), Expect = 0.0 Identities = 476/510 (93%), Gaps = 7/510 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||| Sbjct 22609 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATTGTTATTTCTTGTCACTACCT 22668 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22669 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 22728 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 22729 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 22788 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22789 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 22848 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||| ||||| || | |||||| ||| |||| Sbjct 22849 CAAGGCCATGCGATTCGAAAAGTTATTATGACTCACCAAAAAAAGCCCGAA-GGCATTGG 22907 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 22908 TTTTTTATCTAATAAATACATCCCTTCCAAAAAAGTCGGGATTTTTAGCATGTATTAGCT 22967 Query 357 CTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 22968 CTAGAATTACCACGGTTATCCAAGTAGTTGAGGTACTATCAAATAAACGATAACTGATTT 23027 Query 416 AATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 23028 AATGAGCCATTCGCAGTTTCACAGTACAAAATTGCTTATACTTAGACATGCATGGCTTAA 23087 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 23088 TCTTTGAGACAAGCATATGACTACTGGCAG 23117 Score = 751 bits (832), Expect = 0.0 Identities = 476/510 (93%), Gaps = 7/510 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||| Sbjct 2441515 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATTGTTATTTCTTGTCACTACCT 2441456 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2441455 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2441396 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 2441395 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 2441336 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2441335 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 2441276 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC-CCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||| ||||||| | |||||||| | |||| Sbjct 2441275 CAAGGCCATGCGATTCGAAAAGTTATTATGACTCACCAAAAAAAGCCCGAAGG-CATTGG 2441217 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 2441216 TTTTTTATCTAATAAATACATCCCTTCCAAAAAAGTCGGGATTTTTAGCATGTATTAGCT 2441157 Query 357 CTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 2441156 CTAGAATTACCACGGTTATCCAAGTAGTTGAGGTACTATCAAATAAACGATAACTGATTT 2441097 Query 416 AATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 2441096 AATGAGCCATTCGCAGTTTCACAGTACAAAATTGCTTATACTTAGACATGCATGGCTTAA 2441037 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 2441036 TCTTTGAGACAAGCATATGACTACTGGCAG 2441007 Score = 751 bits (832), Expect = 0.0 Identities = 476/510 (93%), Gaps = 7/510 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| |||| |||||| || ||||| |||||||||||| Sbjct 2452404 GTACTCATTCCAATTACAAGACCCGAAAGGGCCCTGCATTGTTATTTCTTGTCACTACCT 2452345 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2452344 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2452285 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 2452284 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTAAAACCATGGTA 2452225 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2452224 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 2452165 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC-CCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||| ||||||| | |||||||| | |||| Sbjct 2452164 CAAGGCCATGCGATTCGAAAAGTTATTATGACTCACCAAAAAAAGCCCGAAGG-CATTGG 2452106 Query 300 TTTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct 2452105 TTTTTTATCTAATAAATACATCCCTTCCAAAAAAGTCGGGATTTTTAGCATGTATTAGCT 2452046 Query 357 CTAGAATTACCACGGTTATCCATGTAG-TAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| Sbjct 2452045 CTAGAATTACCACGGTTATCCAAGTAGTTGAGGTACTATCAAATAAACGATAACTGATTT 2451986 Query 416 AATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATGGCTTAA 474 |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 2451985 AATGAGCCATTCGCAGTTTCACAGTACAAAATTGCTTATACTTAGACATGCATGGCTTAA 2451926 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 2451925 TCTTTGAGACAAGCATATGACTACTGGCAG 2451896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399939584