Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq210 255 2e-65 seq269 152 2e-34 seq3 102 3e-19 >seq210 Length=797 Score = 255 bits (282), Expect = 2e-65 Identities = 143/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 443 AGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 384 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 324 Query 418 CGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||| Sbjct 323 CGAGGCATTTGGCTACCTTAAGAG 300 >seq269 Length=369 Score = 152 bits (168), Expect = 2e-34 Identities = 87/89 (98%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 CCCGCCGTTTACCCGCGCTTGGTTGAATTACTTCACTTTGACATTCAGAGCACTGGGCAG 60 Query 515 AAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||| ||||||||| Sbjct 61 AAATCACATTGCGTCAACACCACTTTCTG 89 >seq3 Length=2936196 Score = 102 bits (112), Expect = 3e-19 Identities = 79/93 (85%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATTCAGAGCA 506 ||||||||| ||| ||||||| || |||||||||| |||||||||||| ||||| || | Sbjct 1932278 AGTTACTCCAGCCATTTACCCTCGTTTGGTTGAATAACTTCACTTTGACAATTCAAAGAA 1932337 Query 507 CTGGGCAGAAATCACATTGCGTCAACATCACTT 539 | |||||||||||| |||||||||| | || || Sbjct 1932338 CCGGGCAGAAATCAAATTGCGTCAATACCATTT 1932370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635194832768