Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq169 719 0.0 seq41 163 9e-38 >seq169 Length=1422 Score = 719 bits (796), Expect = 0.0 Identities = 415/425 (98%), Gaps = 1/425 (0%) Strand=Plus/Plus Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCTCCGG 60 Query 140 AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 61 AATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCG 120 Query 200 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT 259 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 121 AAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGTT 180 Query 260 AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACA 319 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 181 AAGTTATTATGAATCACCAGGGAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACA 240 Query 320 CCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 300 Query 380 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 301 GTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAG 360 Query 440 TATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 419 Query 500 GGCAG 504 ||||| Sbjct 420 GGCAG 424 >seq41 Length=496475 Score = 163 bits (180), Expect = 9e-38 Identities = 148/182 (81%), Gaps = 7/182 (4%) Strand=Plus/Minus Query 167 TTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG-CAGAAATTTGAAT 225 |||| ||||||| | ||| || |||||||||| ||||| ||||||| ||| ||||||||| Sbjct 235859 TTGACACCATGGCATGCCCCTGTCCTACCATCAAAAGT-GATAGGGGCAGGAATTTGAAT 235801 Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCC 285 |||||||||||||| ||| ||||||||||| ||||| || ||| || | | |||||| Sbjct 235800 GAACCATCGCCGGCACAAAGCCATGCGATTTAATAAGTCATCATGTATTAGTAGGGAGCC 235741 Query 286 CCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGC 345 ||||| | |||||||||||| |||| |||||| | |||| ||||| || ||||||| Sbjct 235740 CCGAA----ATCGGTTTTTTATCTGATAATTACACCACCTCCGGAGTCGAGG-TTTTAGC 235686 Query 346 AT 347 || Sbjct 235685 AT 235684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395227136