Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotium_20cepivorum_20[genbank_20GCA_5F002162485.1_202017-05-31] 316 sequences; 56,334,999 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq36 250 2e-61 >seq36 Length=569963 Score = 250 bits (276), Expect = 2e-61 Identities = 696/1060 (66%), Gaps = 16/1060 (2%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || || ||||||||||| |||| | |||| || || ||||| |||||| | Sbjct 131386 AAAGCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGGTGACGGAAATTGCTCTTT 131327 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 || || || |||| || || || |||||||| || || ||||| || | || Sbjct 131326 CTGGCTTCTTGTACTGGATAATAGTTGATATCAATGATCTTGTTCAAGTTTCTAACGACA 131267 Query 65927 ACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCC 65985 || || |||| ||| | | | || ||||||| || || | || | || | Sbjct 131266 ACTTGGACGACCTCGT-GAAGCTTTTGGAAATCATAAG--TTCCCTCATTCATGT-TGAC 131211 Query 65986 GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGG 66045 | ||| |||| | | |||| || || | ||| ||| ||| | ||| || || Sbjct 131210 G--------AAAGTTGGTA-GAGCAATTGAAGCCAAGTTACAGCAAGCAACCTCATCTGG 131160 Query 66046 AGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTG 66105 || | ||||| || || || ||||||| || || ||| || || || | |||| Sbjct 131159 TGCAGAGTACTCAACGATCTCTGTGCACAAGTTGGAGCTGCGAATAGTACCAAGGTTCTT 131100 Query 66106 TTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAAC 66165 ||| || ||||| ||||||||||| ||||| | |||| | ||| | |||||||| Sbjct 131099 TTGGTTGCTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCGGTCTCGGT 131040 Query 66166 TTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225 ||| | ||||| || | || |||||| | ||||| | || | | | |||| | Sbjct 131039 TTGAGCCTCAAGAATAGAGTACCAAAGCTTTTGAGCCTTGATAGT-CTTGCGACCCTTTC 130981 Query 66226 TTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGAC 66284 | | || | ||| |||||||| ||||| || || | || || | || || Sbjct 130980 CTGCCTTTTCATAACTCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAAC 130921 Query 66285 ATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAA 66344 || || | | || ||||| || | ||| || |||| || ||| ||||| ||| | Sbjct 130920 CAGGGCATTCATTGGGGCACATAAGAGTCCATTCTCCATTCTTTTCAACACGCTTCATGA 130861 Query 66345 ATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGT 66404 | | |||||| ||||| | ||| |||||||||||||| || || || || | |||| Sbjct 130860 ACAAATCAGGAATCCACAAGGCATAGAAGAGATCGCGCGCACGAACTTCTTCCTTACCGT 130801 Query 66405 GATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGG 66464 | |||||||| | || || ||||| || | |||||||||||||| || ||||| | | Sbjct 130800 GGTTTTTGCGTAGATCAAGAAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAG 130741 Query 66465 CGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGA 66524 | |||| || ||||||| |||||||| || || || | || |||||||| | Sbjct 130740 CAAACGCACCAGGACGTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAA 130681 Query 66525 CACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTC 66584 | || | ||| || || | || || || || || ||||| ||| ||||| | || Sbjct 130680 CTCGAAGCATGGGAACAATACCATTGGAATTTCCGTTGGTACCGGCGATGTATGCACCAG 130621 Query 66585 GTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCAC 66644 || || || ||||| || ||||||||||||||||| |||| ||||| |||| Sbjct 130620 TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCAC 130561 Query 66645 AATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || || || | | || || ||||| ||| |||| ||| | |||| ||| Sbjct 130560 AAATCTTCAAAGTATCGTAGATACCATCAATACTGTCCTCCTTCATGTCGATGAGGAAGC 130501 Query 66705 ATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAA 66764 | || |||||| | || || || | || || ||||| || || | ||| || |||| Sbjct 130500 AAGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAAAAGAGTGTTGGGGAAGCATGTGTAA 130441 Query 66765 AGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 |||| | | ||||| | ||||| || ||||| || || || | || || |||| Sbjct 130440 AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCGATATCATCACCGTGAA 130381 Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 | || | ||| ||||| | | | |||||| ||||| Sbjct 130380 TACCAACGGCAACACGCATGATCATTTGTTGAGGACGTTC 130341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566468866240