Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amanita_20bisporigera_20[genbank_20GCA_5F001983365.1_202017-02-02] 10,390 sequences; 75,346,262 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2549 324 3e-86 seq5150 98.7 2e-18 seq83 98.7 2e-18 seq12 98.7 2e-18 >seq2549 Length=1493 Score = 324 bits (358), Expect = 3e-86 Identities = 261/313 (83%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| || ||| ||| ||| |||| || | | | ||||||| | |||||||| |||||| Sbjct 1162 GTCTGGATGGGTCTTACCTCCTGGTGAGCTGGCGTGCCCTTTATTGGGTGTGTCGGGGAA 1221 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 || |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||| Sbjct 1222 CCGGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCTGTTGCCTGAATACATT 1281 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 1282 AGCATGGAATAATGGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 1341 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||| ||| ||||| | ||||| | | | |||||||||||||||||| Sbjct 1342 ATGATTAATAGGGACAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGGA 1401 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 || | | ||||| |||| ||||||||| || ||||||||||||||||| |||| | | Sbjct 1402 TTGACTCAAGACCGACTAGTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGGA 1460 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 1461 CGAAGGTTAGGGG 1473 >seq5150 Length=3606 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||||||||||||||||| | | ||||| |||| ||||||||| || ||||||||| Sbjct 3602 AGAGGTGAAATTCTTGGATTGACTCAAGACCGACTAGTGCGAAAGCATTTGCCAAGGATG 3543 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| |||| | ||||| |||||||| Sbjct 3542 TTTTCATTGATCA-AGGACGAAGGTTAGGGG 3513 >seq83 Length=8327 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||||||||||||||||| | | ||||| |||| ||||||||| || ||||||||| Sbjct 5 AGAGGTGAAATTCTTGGATTGACTCAAGACCGACTAGTGCGAAAGCATTTGCCAAGGATG 64 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| |||| | ||||| |||||||| Sbjct 65 TTTTCATTGATCA-AGGACGAAGGTTAGGGG 94 >seq12 Length=2416 Score = 98.7 bits (108), Expect = 2e-18 Identities = 85/104 (82%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | | | |||||||||||||||||||| | | ||||| |||| ||||||||| Sbjct 2 GTATTGAGTCGCTAGAGGTGAAATTCTTGGATTGACTCAAGACCGACTAGTGCGAAAGCA 61 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||||||||||||| |||| | ||||| |||||||| Sbjct 62 TTTGCCAAGGATGTTTTCATTGATCA-AGGACGAAGGTTAGGGG 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915104910720