Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01]
16 sequences; 23,647,732 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq11 86.0 1e-14
seq6 86.0 1e-14
>seq11
Length=816260
Score = 86.0 bits (94), Expect = 1e-14
Identities = 79/97 (81%), Gaps = 5/97 (5%)
Strand=Plus/Minus
Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118
|| |||||| |||| |||||||||||| ||| ||| ||||||| ||||| || ||
Sbjct 770903 CACGACGGTTGAAACTCAGCTCACGTTCTTTATCAGT---TGAACAAGTCAACG-TTGCC 770848
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||| ||||||| || | ||||||||||||||||||||
Sbjct 770847 GAACTCTGCTT-GGCAAGATAGGAAGAGCCGACATCG 770812
>seq6
Length=1670010
Score = 86.0 bits (94), Expect = 1e-14
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||| | | ||||||||||||| |||||||| | ||||||||||||||||||
Sbjct 734318 CATCAGTAGGGCAGAGCTAACCTGTCTCACGACGGTCTTATGCCAGCTCACGTTCCCTAT 734259
Query 92 TAGTGGGTGA 101
||| | ||||
Sbjct 734258 TAGAGCGTGA 734249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854399863296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |