Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20brassicae_20[genbank_20GCA_5F001600295.1_202016-03-01] 16 sequences; 23,647,732 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq5 109 1e-21 >seq5 Length=1777877 Score = 109 bits (120), Expect = 1e-21 Identities = 113/147 (77%), Gaps = 11/147 (7%) Strand=Plus/Minus Query 164 CCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGG-----G 218 || |||| ||||||||||||||| ||||| |||||||| | ||| ||||| | Sbjct 454139 CCGGCCATGCCGTCCTCGCCCCAGCGGTACGCGCGGCT-----CTTGGACATGGAGAACG 454085 Query 219 GGAAGTAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGC 278 ||||| | ||| |||||||| | |||||||||||||| ||||| || ||||| || | Sbjct 454084 GGAAGCTGTTCCACGCGTCGCCGTTCGCGCTGTAGTCTTCACGCACAGTACCCCACTGAC 454025 Query 279 GTTCGCTCAGGTAGGGGCCCCACTCGC 305 |||| |||||| |||||||| |||| Sbjct 454024 GTTCAGACAGGTACGGGCCCCA-TCGC 453999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999838720