Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5 109 8e-22 >seq5 Length=1942108 Score = 109 bits (120), Expect = 8e-22 Identities = 89/106 (84%), Gaps = 7/106 (7%) Strand=Plus/Minus Query 3 ACAAAGGGCAGGGACGTAGTCAAC-----GCGAGCTTGATGACTCGCGCTTACTAGGAAT 57 |||||||||||||||||| ||||| ||||||| | |||||| ||||||||||| || Sbjct 204098 ACAAAGGGCAGGGACGTAATCAACTCGACGCGAGCTGG-TGACTCACGCTTACTAGGTAT 204040 Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 | |||||||||||| ||| |||| || || |||||||||| ||||| Sbjct 204039 T-CCTCGTTGAAGAGCAATAATTACARTGCTCTATCCCCAGCACGA 203995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999796020