Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-14 >seq1 Length=4014173 Score = 96.9 bits (106), Expect = 1e-14 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 89109 GCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCGGCC 89168 || || ||| | || || ||||||||||| |||||||||||||||||||| || ||| Sbjct 2043304 GCCTCGTGCGCCCCGCCCATCCGTTACCCTAACGTGTACGGCATCGACATGCCCTCGCAG 2043245 Query 89169 AAGGAGCTCATTGCTTCTGGTCGCACCGAGC-ACGAGGTGGCTCTCCTCCTCGGAGCCGA 89227 |||||||| | |||| ||| |||| ||| | | ||| | || | | | || ||||| Sbjct 2043244 CAGGAGCTCGTCGCTTATGGCCGCA-CGACCGAGGAGATTGCCGAGCACATTGGCGCCGA 2043186 Query 89228 CCAGGTCATCTATCAGAGTGTCGACGACTTGCAAGCGGCCTGTCGCCAGTTCAATCC 89284 | |||||||| |||| | | |||||| | | | | ||||||||| |||| || Sbjct 2043185 TCTCGTCATCTACCAGACTATGGACGACCTTGTCGAGTCGTGTCGCCAGATCAACCC 2043129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738433858344