Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2 111 6e-19 >seq2 Length=3730214 Score = 111 bits (122), Expect = 6e-19 Identities = 119/154 (77%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | ||||||||||| ||||| ||||| || || Sbjct 3251236 CCGATGGTCATACGCGACGGAATGGCGTGCGGGTTGATGATAATGTCCGGCACAATTCCC 3251295 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || ||||| ||||| | || | || || ||| | | ||||||||| ||||| || | Sbjct 3251296 TCGGCAGTAAACGGCATGTCCTCCTGGCGGTACG-TAATACCAATGGTACCCTTCTGTCC 3251354 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | || || ||||||||||||||||| ||||| Sbjct 3251355 GTGACGCGACGCAAACTTGTCGCCAAT--CTGGG 3251386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885723797004