Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq22 118 2e-24 >seq22 Length=1986 Score = 118 bits (130), Expect = 2e-24 Identities = 137/184 (74%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 |||| |||||||||||||||||| ||||| |||||||||| | || | | |||||||| Sbjct 11 TTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAGAG 70 Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTC-------AT 300 ||| |||||| ||||||||||| |||||| | || ||| || || Sbjct 71 TCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCTAATCATTAAAAAT 130 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360 | ||| || | || |||| ||||||| | |||||||||||||||||||| | ||||| Sbjct 131 AATTAGGTACTCTTTATCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAATATAGT 190 Query 361 TCTC 364 |||| Sbjct 191 TCTC 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399691904