Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq8 129 1e-27 >seq8 Length=1129179 Score = 129 bits (142), Expect = 1e-27 Identities = 170/231 (74%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 77 AGGCCGAACAGGCGCTCCTTGATGATTCCATCGCGCTCGTTCCACAGGGCCAGGCCCAGG 136 |||||||| || |||||||||| ||| | ||| |||||||||| || | | Sbjct 576425 AGGCCGAAGAGACGCTCCTTGAGGATCTCGTCGTTGCCGTTCCACAGCATGAGCGAAAAG 576366 Query 137 CACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCG 196 ||| || || ||||| || ||||| | ||||||||||||||| ||||| ||| Sbjct 576365 CACAGCCGCTGGTGGTTGTCCGAGATGCCCGCAATGCCGTCCTCGCCCCAGCGGTATGCG 576306 Query 197 CGGCTGCGTG--CATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCCATCGGCGCTGTAGT 254 ||||| | || |||||| | ||| || | | |||||||||||| | ||||||||||| Sbjct 576305 CGGCT-CTTGGCCATGGTGAACGGGAAACT-GTTCCAGGCGTCGCCGTTGGCGCTGTAGT 576248 Query 255 CTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAGGGGCCCCACTCGC 305 | |||||||| |||||||| || || || ||||| |||||||| |||| Sbjct 576247 CCTCGCGCACTGTGCCCCACTGCCGCTCCGAGAGGTACGGGCCCCA-TCGC 576198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999707680