Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq29 129 1e-27 >seq29 Length=1025 Score = 129 bits (142), Expect = 1e-27 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAG-GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCA 62 |||||||||| | |||||| ||| ||| || || |||| |||| |||| ||| || Sbjct 821 CTTTACAACCTAATTAGCCTTCATCACTCACTTGGTATTGCTGGATCAAGCTTTCGCTCA 880 Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 |||| ||| ||||||||||||||||| | ||| ||| |||||||||||| ||| | Sbjct 881 TTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCAAT 939 Query 123 GTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGC 182 ||||||| |||| || ||| |||||||| ||| |||| || ||| | | ||| | | Sbjct 940 GTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTCGGCTTGGTAGTCTTTTAAACTAC 999 Query 183 CAACTAGCTAATC 195 |||||| |||||| Sbjct 1000 CAACTACCTAATC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222399645504