Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq29 87.8 4e-15 >seq29 Length=1025 Score = 87.8 bits (96), Expect = 4e-15 Identities = 155/223 (70%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| ||| | || ||||| ||||||| | | |||||||| |||| | || | Sbjct 800 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCATCACTCACTTGGTATT 859 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||| Sbjct 860 --GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGT 916 Query 185 TTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTA 244 |||| |||||||||||| ||||||||| || | | || ||| | | ||| || || Sbjct 917 TTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTC 976 Query 245 GGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCA 287 |||| ||| | | ||| | || |||||||||| ||||| Sbjct 977 GGCTTGGTAGTCTTTTAAACTACCAACTACCTAATCTTACGCA 1019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068799690048