Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 1e-14 >seq6 Length=2185627 Score = 96.9 bits (106), Expect = 1e-14 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 ||||||||||||||| | | || ||||||||||| ||||| || | ||| || Sbjct 1746860 GTCATGCGCGACGGGAAACCGTGAGGGTTCATGATAATGTCTGGGCTGATGCCTTGGTCG 1746801 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||| |||||||| | | ||| | |||||| || ||||| ||||||||||| Sbjct 1746800 TTGAACGGCATGTCTGCCTGAGGGACGATGAGGCCGCACACACCCTTTTGGCCGTGGCGC 1746741 Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGATGGAG 449185 | | |||||||| ||| ||||||| ||| || |||| || ||||||||| ||| Sbjct 1746740 GAGGAAAACTTGTCGCCCAGCTCGGGGCGGCGGGTTTGGCGCGTCAGGATCTTGAT-GAG 1746682 Query 449186 C-GGAAGCCGTC 449196 | || |||||| Sbjct 1746681 CTGGTTGCCGTC 1746670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738406496142