Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01]
17 sequences; 24,114,851 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq9 226 7e-57
>seq9
Length=4112
Score = 226 bits (250), Expect = 7e-57
Identities = 210/268 (78%), Gaps = 9/268 (3%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||| | | ||||| |||||||||||| ||||||||||| | |||||
Sbjct 309 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 250
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 249 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 190
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192
|||||||||||||||||| ||| |||| || | |||| ||| | |
Sbjct 189 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCTT---------AAACATCTCC 139
Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252
||||| ||||| |||||||||||| |||| ||||||||| || || | || ||||
Sbjct 138 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 79
Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCA 280
||| || ||||||| ||||||||||||
Sbjct 78 AGTCCTAAGTTTTTATTAAACAGTCGCA 51
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260799785664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |