Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq9 226 7e-57 >seq9 Length=4112 Score = 226 bits (250), Expect = 7e-57 Identities = 210/268 (78%), Gaps = 9/268 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||||| ||||||||||| | ||||| Sbjct 309 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 250 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 249 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 190 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 |||||||||||||||||| ||| |||| || | |||| ||| | | Sbjct 189 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCTT---------AAACATCTCC 139 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 ||||| ||||| |||||||||||| |||| ||||||||| || || | || |||| Sbjct 138 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 79 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCA 280 ||| || ||||||| |||||||||||| Sbjct 78 AGTCCTAAGTTTTTATTAAACAGTCGCA 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799785664